Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1015 ATGGCATATCAAATGGCATCACTGAAAATTGAGATGAAAGAAGTAGTGCATGTTAAACCTTCTAAACCAACTCCTTCCATTGTTCTTCCTCTATCTGCACTTGAACATAGACCCTATCCTGATAGCATTTGGCCTATTGTTCATGTTTACCAATCACCCTCAAATGGCCAACTAGATCCTGCTTTTGTGCTCAAACAAGCCCTCTCAAAGGCATTGGTTTATTATTACCCTCTTGCAGGTAAGCTAGTAAAACAACCCAACGGAAAAGTTGCTATCAATTGCAACAATGATGGAGTTCCATTCTTGGAAGCAATTGCAAATTGTGAGCTTTCATCTCTCAATTATCTAGATGATCATGACATTCGAATTGCAAAACAATTGGTTTTTGATTTTCATCCTCAACAAGATGAAAATGAATACCCACATCCAGTTTCATTCAAGTTGACCAAATTCCAATGTGGAGGTTTCACAATTGGAATGAGCACATCACATATTGTATGTGATGGTTGGGGAGCATGTAAGTTCTTCCATGCCATTGTTGAACTTGCAAGTGGAAAAAGTGAACCCTTTTTGAAACCTGTTTGGGAGAGAGAAAGATTAATAGGATCAATCACTACACAACCAATGCCAAATCCAATGGATGAAACCACTGCTGCAGTTTCACCATTTCTTCCAGCCACTGATGTTATGTATGAGTTGTTTAAGGTGGACAAGGAGAGTATAAGAAGACTCAAGATGAGTTTAATGAAGGAAATTAGTTGCAATGAATCAATGGAACAAAGTTTCACAACATTTGAATCTCTTGCTGCATATGTCTGGAGATCAAGAGCTAGGGCCTTAAACCTAAATAATGAAGGGAAAACTTTGCTTGTTTTCTCAGTGCAGGTGAGACAACACATGAGTCCTCCTTTGTCTGATGGGTACTATGGAACTGCTATCACAGAAGGACAAGTTGTGCTAACCATGAAGGAGCTCAATGAGAAACCACTCTCAGATATAGTGAAGCTTGTCAAAGAGAGTAAAAATGTTGCATTCACTGGTGATTTTATCAAAAAAACAATTGATACATTGGAGTCTAATCCAGAGAATTTTAATGTTGAAGAAGGTCCTGGTGCAACCTTGGCTTTATCAGATTGGAAGCATTTAGGTTTCATGCCAAATGTGGATTTTGGATGGAAGGAACCAATAAATATGGTACCTGCTCCATGCAACATGTTTGAGTATGAGGGTTTGTGCATTTTCTTGTCTCCTAGTAACCATGATCCATCAATGGAAGGAGGAGTTAGGGTTTTCATATCACTCCCTAGTGTTGCCATGCCTAAGTTTAAAGAGGAGATGGAAGCTCTCAAGGTTATTACACCTTAG 1365 0.389 MAYQMASLKIEMKEVVHVKPSKPTPSIVLPLSALEHRPYPDSIWPIVHVYQSPSNGQLDPAFVLKQALSKALVYYYPLAGKLVKQPNGKVAINCNNDGVPFLEAIANCELSSLNYLDDHDIRIAKQLVFDFHPQQDENEYPHPVSFKLTKFQCGGFTIGMSTSHIVCDGWGACKFFHAIVELASGKSEPFLKPVWERERLIGSITTQPMPNPMDETTAAVSPFLPATDVMYELFKVDKESIRRLKMSLMKEISCNESMEQSFTTFESLAAYVWRSRARALNLNNEGKTLLVFSVQVRQHMSPPLSDGYYGTAITEGQVVLTMKELNEKPLSDIVKLVKESKNVAFTGDFIKKTIDTLESNPENFNVEEGPGATLALSDWKHLGFMPNVDFGWKEPINMVPAPCNMFEYEGLCIFLSPSNHDPSMEGGVRVFISLPSVAMPKFKEEMEALKVITP 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1015 454 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 450 - -
Lal5g1015 454 Gene3D - 4 210 IPR023213 -
Lal5g1015 454 PANTHER ACYL TRANSFERASE 4 5 450 - -
Lal5g1015 454 Gene3D - 225 446 IPR023213 -
Lal5g1015 454 Pfam Transferase family 9 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1015 Lal-Chr5 12520870 12524990 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1015 8 444 Monolignol Biosynthesis Gene Families AT5G48930 26.932 6.84e-37 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1015 K20240 - gmx:100783730 497.664