Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1012 ATGGCTAATGAGAAGACTCCATTCTCCCTTCATATGAAGGATATTGTGATTGTTAAACCCTCCAAACCCACACCTTGTGTTACTCTTTCTCTGTCCACATTTGACAATAACCCTGCTCTAAACATTCTCTGCCACACCATTTATGTATACCAAGCAAATCTTGATTACCCAAATGGCCAACACCAACTAGACCCTGCTCATGTGATAAAAGAAGCTCTCTCAAAGGCTTTGGTTTATTACTATCCTCTTGCAGGGAAGATAATAAGAAATGATGATGGAAAACTTAGAATCAAGTGCAATGGTGATGGAGTACCATTCTTGGAGGCAAGTGCTAACTGTGAACTCTCTTCTCTTCATTATCTTGAAGGGATTGATGTTCCAACTTTACAGAAGTTGTTGTTTGATAACCCTTCTCAAGATGAAACTAGTGAACATGCCTTGGTTTTCAAGGTGACCAAGTTTCTCTGTGGGGGCTTCACAATTGGTTTGGGATTGTCACATGCTGTTTGTGATGGATTTGGTGCTTCACAATTCTTCAGAGCTCTGGCCGAACTCGCGAGCGGAAAAAGTGAGCCGACTGTGAAACCTGTGTGGGAAAGGGAGAAGCTAGTAGGGACAATCCTTAAGGAACCACTCAAACTTCCCATGGATGAAACTTTAAGAGCAGCTTCACCATTTTGGCCAACTACAGAGATTTCACATGAATGCTTTAACTTGAATGGTGATATCATACAAAGACTCAAAATGAGACTGATGAAGGAAGGTGAGTGTGTGGATGATAGCTTCACAACTCTTGAAACACTTGGTGCCTATGTATGGAGATCAAAAGCTAGAGCTTTGGAATTGAGTTCTGATGGACAAACATTGTTCTGTTTAGCAGTTGGAGTGAGACACTTATTGGATCAACCATTACCTGATGGGTACTATGGGAATGCTTTTGTGGCTGCAAATGTTGTGTTAACAGTGAAGGAACTGAAAGAAAGACCACTCTCATATGTTGTAAAGCTCATTAAAGAGAGCAAAAAACTTGCTTGTAATAATGAATATATCAGAAACTCAATTAACATGTTAGAGACAATGATCCAATATAACATTAGGATTGAAGGTACAGGTGCATCAATGGTATTAACAGATTGGAGGCAATTGGGTTTATTAGAAGAAGTGGATTTTGGATGGAAGGCTTCAGTGAATATAGTACCAGTCCCATGGAACATGTTTGGGTTCATTGATTTGTGTCTTTTTTTGGCTCCTAGTAACTTGGATCCTTCAATGAAAGGAGGAGTAAGGGTATTTGTAACCCTCCCCAAAGCATCCATGCCCAAGTTCAGAGAAGAGATGGAGGCCCTCAAGGTTATGCTAGACCCATAA 1368 0.405 MANEKTPFSLHMKDIVIVKPSKPTPCVTLSLSTFDNNPALNILCHTIYVYQANLDYPNGQHQLDPAHVIKEALSKALVYYYPLAGKIIRNDDGKLRIKCNGDGVPFLEASANCELSSLHYLEGIDVPTLQKLLFDNPSQDETSEHALVFKVTKFLCGGFTIGLGLSHAVCDGFGASQFFRALAELASGKSEPTVKPVWEREKLVGTILKEPLKLPMDETLRAASPFWPTTEISHECFNLNGDIIQRLKMRLMKEGECVDDSFTTLETLGAYVWRSKARALELSSDGQTLFCLAVGVRHLLDQPLPDGYYGNAFVAANVVLTVKELKERPLSYVVKLIKESKKLACNNEYIRNSINMLETMIQYNIRIEGTGASMVLTDWRQLGLLEEVDFGWKASVNIVPVPWNMFGFIDLCLFLAPSNLDPSMKGGVRVFVTLPKASMPKFREEMEALKVMLDP 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1012 455 Gene3D - 7 210 IPR023213 -
Lal5g1012 455 Pfam Transferase family 15 448 - -
Lal5g1012 455 Gene3D - 228 446 IPR023213 -
Lal5g1012 455 PANTHER ACYL TRANSFERASE 4 5 450 - -
Lal5g1012 455 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1012 Lal-Chr5 12487035 12488402 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1012 10 444 Monolignol Biosynthesis Gene Families AT5G48930 28.355 8.08e-44 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1012 K20240 - gmx:100801843 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1012 5 12487035 12488402 Lal5g1012 5 12487035 12488402 ECH