Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1009 ATGGAGAAGCCAAAGATACAATTTGGAGATTCTTTCATTTGTCAATCAATTCATAAAATCAACTCTAGAGGATTTTGGTGTGGAGATGACCCACTTGCTTATTCTCTTCCTCTTTTTCTTCTTCAACTTTTCATCATGTACATTTTTACCCGCTTCATTTACACTATTCTCAAGCCATTTGGTCAACCCTCTTTTATTTCTCACATTCTTGGTGGTGTGACTTTAGGTCCTTCAGTTCTATCCCATAACTCAGCATTTTCAGACAAGGTTTTCCCTTCAAAAGCAAAAAATGTGCTTGATACCATAGCATTTTTTGGTTTCTTGTTATTTGTCTTCCAACTTGGGGTTAAGGTTGATCCAACCATTATTTATAGATCACCTAAAAGGGCTTTCTCCATTGGAATTTTAGCTTTTTTTGTTCCTTTCACACTTTCTTCAATGGCTGTGTTTTTCCTCCGCCAGTTTGCATCATTGGATCATGATTTTTCAAGGATGCTCTCTATTGTGGTGCAAATTCAATGTATAACAGCAATTCCAGTAATCTCAGGCTTTCTTTCTGAACTTCAGATCCTCAATTCAGAGATTGGAAGGTTGGCAATTTCTTCTTCATTTGTGTGTGACATTTGCTACTGGTTTATTGTGACAATAAAGTATGGAACATACTTAACTTCCACAAAATCAGTAGGAGTAACTATCGGCTCCGGCATATCGAGTTGTCTTCTTTTTTTGTTCATCATGTATGTAGTTCATCCTGCTGCATTATGGGCAATTCAACACACAGCAGAGGGGAAACCTGTTCAGGAAATATACATATTTGGGGCTCTTTTAACACTATTGTTCTGTGGATTTATGGGTGAAGCCATTGGCCTAAATGCAATTGTTGTAGCTTTCTTGGTCGGTCTGGCTATACCCGATGGCCCGCCGTTAGGAGCAGCACTGGTAGACAAGTTAGACTGTTTTGCTTCAGTAGTACTCTTGCCTATCCTTTACATTATAGGTGGATTAAGGACAGATGTTTATGCCATACAGAAGATGAAGAATTTGGGTTCAATTTTGTTAATTGTTTGTGTTTCTTTTTGTGGGAAAATTGTAGGGGCTTTGTTGCCTCTCCTTTTCTGTAGAATGCCGTTTCGAGATGCCTTATCGCTCGGTCTTATAATGAACTGCAAAGGCAACATTGAATTGGCTTTGTTGATTAACTGGAAATTATTGAATGCTCTGAGTGATGAATGCTTTACAATTATGGTTATTACTTTAGTGGTTACAACCGCTCTTGTGACACCTATCGTGAAAGCTCTTTACGATCCTTCCATGAGGTTTCTTGCTTACAAAAGAAGGACGCTTTTGCATCACCGCAATGACGAAGAACTGCGTATAATGGCTTGCATCCACAAACAAGATAATGTCTTGGCAATTTTGAACCTACTTACTGCTTCCAATCCAACTGAAGCAAGCTGCATTGACTTAGTTGTACTCCATCTTGTTAAGCTTGTAGGCCAAGCTTCCTCTGTTCTTGTTTCGCATATGCCTCGTGAAAGGCCTAGTAAACATGCTTCTCAATCTGAGAAAATTTTCAATGTATTCAGCAAATTTGAAGAAGCATTCAGGGGCAAGCTCACAGTGCATTGCTATAAAGGCATATCTCCATATGCTACAATGCACAATGATGTGTGTTACTTAGCACTTGAAAAGAGAACTACTTTTATAATCTTACCCTTTCATAAGCAATGGATAATTGGAGAGACAACAGAGTCAACTTTTGCCTTCAAACAACTGAACAAAAATGTTTTAGAGAAAGCTCCCTGCTCAGTCGGAGTCCTCATCGATCGCGGCAATCAGAAGAAATTTTGGTGTGGTTATATGAAAGAATCCATATACCAAGTCGCTGTATTCTTCTTCGGCGGTACAGATGATCGAGAAGCACTAGCATATGCAAGACGCATGTCAGAACAACCTAATGTGCATGTTACTCTATTTCATTTTTCATCTATAGCGGATATCGTCGGTGGTACAGAAAGGAGCAAAATGCTGGATACTCAGGTTTTAAGTGACTTTAGGCTCAATGCATTCAGGAATAATAGAGTTTCTTACAAAGATGAAATGGTAATGAACGGAAAGGACGTGATTTCGGTTATCGAATGCATGGAGAGCAGTTATGACCTTGTAATGGTTGGTAGGAGGCATGCGAATTCGCAGTTGATGGCCGAACTTAAGAAATGGAAACAAGGAGAGTTAGGAATTGTGGGAGAGATTCTTGTCTCTTTAAGTACCGGAGCCAAGACATCGATTTTGGTGGTGCAACAACAAACCAGATATTGGGGATCTTGTGATCCAGATGAGATCACACCCTTGAGAAGAGTAGATATATAG 2370 0.3932 MEKPKIQFGDSFICQSIHKINSRGFWCGDDPLAYSLPLFLLQLFIMYIFTRFIYTILKPFGQPSFISHILGGVTLGPSVLSHNSAFSDKVFPSKAKNVLDTIAFFGFLLFVFQLGVKVDPTIIYRSPKRAFSIGILAFFVPFTLSSMAVFFLRQFASLDHDFSRMLSIVVQIQCITAIPVISGFLSELQILNSEIGRLAISSSFVCDICYWFIVTIKYGTYLTSTKSVGVTIGSGISSCLLFLFIMYVVHPAALWAIQHTAEGKPVQEIYIFGALLTLLFCGFMGEAIGLNAIVVAFLVGLAIPDGPPLGAALVDKLDCFASVVLLPILYIIGGLRTDVYAIQKMKNLGSILLIVCVSFCGKIVGALLPLLFCRMPFRDALSLGLIMNCKGNIELALLINWKLLNALSDECFTIMVITLVVTTALVTPIVKALYDPSMRFLAYKRRTLLHHRNDEELRIMACIHKQDNVLAILNLLTASNPTEASCIDLVVLHLVKLVGQASSVLVSHMPRERPSKHASQSEKIFNVFSKFEEAFRGKLTVHCYKGISPYATMHNDVCYLALEKRTTFIILPFHKQWIIGETTESTFAFKQLNKNVLEKAPCSVGVLIDRGNQKKFWCGYMKESIYQVAVFFFGGTDDREALAYARRMSEQPNVHVTLFHFSSIADIVGGTERSKMLDTQVLSDFRLNAFRNNRVSYKDEMVMNGKDVISVIECMESSYDLVMVGRRHANSQLMAELKKWKQGELGIVGEILVSLSTGAKTSILVVQQQTRYWGSCDPDEITPLRRVDI 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1009 789 PANTHER CATION/H + ANTIPORTER 7 774 - -
Lal5g1009 789 Gene3D - 38 440 IPR038770 -
Lal5g1009 789 Pfam Sodium/hydrogen exchanger family 46 430 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lal5g1009 789 PANTHER OS08G0117800 PROTEIN 7 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1009 Lal-Chr5 12433363 12436193 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1009 11 777 Antiporter Super Family AT2G13620 38.868 9.73e-173 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1009 - - gmx:102665255 1136.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1009 5 12433363 12436193 Lal5g1009 5 12433363 12436193 ECH
Lal5g1009 5 12433363 12436193 Lal22g0334 22 2123371 2126762 PCT
Lal22g0334 22 2123371 2126762 Lal5g1009 5 12433363 12436193 PCT