Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1008 ATGGAAAGTGAAAAGCTAGATGAATTAACTTCCATAGGATACATTAACGGTGAAAGAATGCTATGTCAATATATTGAGAGACACAAAAATAGGGGCATTTGGCTTGAAGATAATCCCTTACATTATACATCATGTATCATAGCATTTGAGATTATTATTGTATACGTTGTTGGAAGACTTGTTCATTTCATTTTGAGGCCTTGTCATCAAAGTATCGTCATTGCACAAATTGTGGCTGGTATAATAATGGGTCCATCACTACTTGGTAGAATTAACAATAACTTTGAGGAAATGTTTCCAGCAGCAAGCAGAATGACACTTAGAACATTTGCAGAATTTGGAATGATAATTCACTTCTTTAGATTAGGTGTTGAGATAGATTCAAAACAACTCTTCAGGATTCGAAAAGAAGCATTGATAATAGGTTTAACAGGTCACATATCAGCTATAATAGTTAGCACTATAGTTTTCATTTTTGTTAGTACTTGGACCCATATAGGACCAGAAGGTGGTGCTTTTTACAGTATTGTGATTACTAGTGGTTTAACATCATTTGTTGTGGTAAGTGGGTTCCTCACTGAGTTGAACATTCTCAATTCAGAGATTGGTCGTTTGGCTCTATCTAGTGCTATGGTTAGTGATGCATGCATGTGGATAATGTATTTTGCTTTTACCAATATTGGTGTAGCATTTAAAACAAAATCATTTATGCCCATTTTCCAATTGGTTTTCTCTCTTAGTTATTTATCAGTCTTGTTCATCTTGCTAAGGCCACTGGTTATATGGATCTCGAGACGTAATCCGAAGGAAAAACCCATGACACAAGGTTATTTTGTGTCAATTATGTTCATACTTTTCTTTGTTGGGATTTCTGCACAATGTGTTGGCCAACCTGCTTTCTTTGCTACTTTTTTGTTCGGCATAATCTTACCCGACGGTCCGCCTTTAGGTTCTGTTCTTACAGAAAAGCTTGATATTGTTGGTTCTACTTTGCTTGTTCCAGCTTATATTACAATTAGTGGGCTAAACACAGGGAATGTTCCTACAATAATAGGAACAAGGCCTGCAGGCATAGAATTTGTCATACTTGCTGGGTACCTAGGCAAGTTTGTAGGCACAATTATACCATCAATTCACTTTGAGGTTCAATTCTGGGACTCTATTACATTGGCTCTAATCATGTGTTGCAGAGGCATTTTGGATCTCATTATATACTACTTACTCTTTAATGCTGAGGCAACAGATGATCTGATTTTCAGCCTTCAGATATATACTATGGTGATTGTAACTGGATCTGTGAATATGATTGTTTATCACATATATGATCCTTCAAGGAGGTACAAATCCTATGCCAGAAGATCAATTAGGGACTCTCAACAAGACATTAATCTCAAAATACTTGTATGCATCCATAATGAAGAAAATGTATATCCAATAATCAACCTTCTTCAAGTCTCAAACCCCACAAAGGCTACACCCCTCTCAGTCTTTGTTCTTCATCTCATAGAGCTTTCGGGCCGGGCAACCTCGATCCTTACCAAAAATAAAATCACTAACCAATCACCATATACGGATGCTTCCTCTAAACCCATAAGCAATGTCTTTGATCAATTTGAGAAGCATAACAAAGGGTGTGTCACCTTGCAGTTATTTACTGCAATTACACCATATGCTAGCATGCATGATGACATATGCTACATGGCAATGGACTCAAAATCAAGCATTGTGATTGTGCCATTCCATAAGCAATGGACAGCCGATGGAAACTCGCGTGTTTACAATAATTCAATTAGGACATTGAACCAGAATGTTCTGAAGAAAGCTCCTTGTTCTGTTGGAGTTTTAGTTGACAGAAGCCAAATGAGAGCCAAATTGTTAATTATCAATGAGAAATCATACTATGAAGTTGCAATGATTTTCCTAGGTGGTGCTGATGACCAAGAAGCGCTAGCTTATAGCCTCCGCTTAGCGCAACATCCAAATGTAAAACTCACTGTGTTTTGGGTAAGGGCTGAAATGCACATCAAACAATATAATATGAAGAATCCTTACATTGACTTGATGGAGCATATAAGGTATAGTAATAAGCATAAAGGGCAAGTAACCTTTAAGGAAGAGATTGTGGAAGATGGGTTAGGAGTAACACAAATTATCAGAACTATGGAAGGGTGTTTTAGTTTGGTTATTGTTGGTAGACATCATGTGGCAGATTCACCATGTACACTAGGCTTGACAGAATGGTGTGAACTACCTGAACTTGGGCCAATGGGGAACCTCTTAGCCGTATCAGATTTTACATTTTCAGTTTTAGTGGTGCAACAACAACATTTTAACTGTGATTTCAAGTATGTTAGGTGA 2358 0.3728 MESEKLDELTSIGYINGERMLCQYIERHKNRGIWLEDNPLHYTSCIIAFEIIIVYVVGRLVHFILRPCHQSIVIAQIVAGIIMGPSLLGRINNNFEEMFPAASRMTLRTFAEFGMIIHFFRLGVEIDSKQLFRIRKEALIIGLTGHISAIIVSTIVFIFVSTWTHIGPEGGAFYSIVITSGLTSFVVVSGFLTELNILNSEIGRLALSSAMVSDACMWIMYFAFTNIGVAFKTKSFMPIFQLVFSLSYLSVLFILLRPLVIWISRRNPKEKPMTQGYFVSIMFILFFVGISAQCVGQPAFFATFLFGIILPDGPPLGSVLTEKLDIVGSTLLVPAYITISGLNTGNVPTIIGTRPAGIEFVILAGYLGKFVGTIIPSIHFEVQFWDSITLALIMCCRGILDLIIYYLLFNAEATDDLIFSLQIYTMVIVTGSVNMIVYHIYDPSRRYKSYARRSIRDSQQDINLKILVCIHNEENVYPIINLLQVSNPTKATPLSVFVLHLIELSGRATSILTKNKITNQSPYTDASSKPISNVFDQFEKHNKGCVTLQLFTAITPYASMHDDICYMAMDSKSSIVIVPFHKQWTADGNSRVYNNSIRTLNQNVLKKAPCSVGVLVDRSQMRAKLLIINEKSYYEVAMIFLGGADDQEALAYSLRLAQHPNVKLTVFWVRAEMHIKQYNMKNPYIDLMEHIRYSNKHKGQVTFKEEIVEDGLGVTQIIRTMEGCFSLVIVGRHHVADSPCTLGLTEWCELPELGPMGNLLAVSDFTFSVLVVQQQHFNCDFKYVR 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1008 785 Gene3D - 46 447 IPR038770 -
Lal5g1008 785 CDD USP_Like 642 734 - -
Lal5g1008 785 Pfam Sodium/hydrogen exchanger family 52 429 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lal5g1008 785 PANTHER CATION/H + ANTIPORTER 33 775 - -
Lal5g1008 785 PANTHER CATION/H(+) ANTIPORTER 14 33 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1008 Lal-Chr5 12407575 12411720 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1008 1 776 Antiporter Super Family AT1G06970 35.570 3.50e-175 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1008 - - lang:109344983 1139.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1008 5 12407575 12411720 Lal3g0663 3 5180483 5191025 LSH