Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1005 ATGACAAGAGTTTTCCCAACACAGAAAAAACTCAATGTGTGTAAAGAACATATTCATTCTTCTCGTGTTCTGCAAGAAAACTCAATGAATGATAGTAGTAAGTTTGCAACTTCAATTCCCCTTACGTGTCAGAAAATAAAAGATTTTCACCCTGTTGGTGTTTTTCATGGTGACAACCCTTTTTCTCACAACTTCGTAATACTAATGCTCGAGTACATTCTCGTTGTCACCATTACACATATTGTTCGTTTTCTTATTAAGCCTCTCAGACAACCTAAGGTTGTATCTCAGATAATTGGTGGTGTCATTGTTGGACCTTCAGTTCTGAAACGGAGTACTTGGTTTAAACATTACATAACAACCGATGGAGCCCAATTTCTGTCAAGAAATCTTGGAATAATGGGTTTCATGTTCTTTGTTTTCATTTATGGTGTGAAGATGGATCCTGCCCTTATAAAAAAAACAGGAAAAATGCACTTATATGTAGCACTAGTTGGCATTAGCATTCCCACAATAGCAGTATTTGGGGTAGCACTATTGTTAAGGAAAACCATGGACAAAGACATAGCCACAAATTCTTCAATAGGAATAATAGCAGCATACTTAGGTATCACAGCATTTCCTGTTCTTTATAATGTCCTAAAAGAGTTTAACCTTCTAAACTCAGATGTAGGAAGAATGGCACTGGCTATGGCAATAATTGGAGATGCATTAGGTGTTTTTACTGTTGTAGTATTTGAGGCTGGAAAACAAGGAGAAACAGGACCTGAAAATGCATTGTGGTATATGGTTTCTCTTGTGGTAATTATTGCATTCGTTTTGTTTTGTGTTAGACCTATAATGATATGGATTAATGACAACATTTCTGAAGAGTTCCCGGTTGAACAATCATATGCAGTTGCTATTCTTCTTGGTGCTTTAGTAATGGGTTTTATAACAGATTTTTTTGGCTTAGCAATTGCAAATGGACCATTATGGTTAGGTTTAGTTATTCCAGATGGACCACGATTAGGAGCAACTATAGTACAAAAGAGTGAGACACTTATGACAGAATTGCTTATACCATTCTCATACATTATGGTGGGATCATATACTGATGTATTTGCCATTGCTGGTGTTGAATGGTCCAATTTGGCACCATTATTTACCATGGTTTTAACTGGGTATTTCACCAAATTCTTTTCTACTTGGATTGCTGCATTATATTGGCAGATTCCATTCAGAGATGGGTTAACTCTCAGCCTTATTATGAGCTTAAGAGGCCAAATTGACGTTATATTGTTTGTGCATATGATGGACAAAGGGATCTTAAAGATACCAGGCTTCACATTATTGGTGCTTATGACAACAGCGATGACTGCAACATGCACTCCTCTAATATCCATACTTTATGATCCTACAAGACCATACATGGTGAGTCAAAGAAGGAACATTCAACACAACCCTTCAAACAAAGACCTTACCATAGTGCTATGCATTTTTGACACTCCAAGCATAAATGGACTCATTCGTCTACTTGATATATCCAATGCATCCTTATATAACCCCCTTTCAGTTTATGCTCTTCGAATAATCGAGCTTGTAGGTCGTTCTACCCCTTTGTTCATCGACCATGTTAACCAAGAAGTGCCTCACATATATAGATGGACACACACTATAAATTCCCTTAAGCATTTTCAGGAGCTTAGAGAGTTTGTGAGGTTTCAATTCTTCACTTCTGTGTCCCCAAAGAAATCAATGTTCCAAGATATTTGTTTACTTTCACTTGAACAAGACGCTTCTTTGATAATCTTACCTTTCAATAAGGGTGGTGGTGTTCATAACCATGCAATCCAAACTGTAAAATTACAAGTCCTTGATCATGCACCTTGTTCCGTTGCAATTTTTGTTGACAAAGGCCTTCTTCCATCAACAAACATAAGAAACTCTCATCGTCAATATACTAAACACAAATTCGCTATGTTGTTTCTAGGAGGTGCAGATGCTAGAGAAGCTCTTGTTTATGCAGATAGAATGGTTGCAAACCCAGAAGTTTCTCTTACAGTAATAAGGTTTTTCTCTCACAACTATTTAGGTGACAATGAAGAAGAGAGAAAGTTAGATGATGAAATTGTGACTTCATTCTGGGTTAAGAATGAGTTGAATAAGGGTGTAGTGTACAAAGAGGTTGTTGTTAGGAATGGAGAAGAAACCATTGCAGGAATTCAAGCTATGAATGATGGTTCTTATGATCTTTGGATAGTGGGAAGAAAACAAGGGATAAACCCTATTTTTATTACAGGGTTATCAGAATGGAGTGAGAATGAAGAGTTAGGACTCATAGGAGACTTTGTTTCCTCTCCAGATTTTTATGGCGCAGCTTCTGTTTTAGTGGTACAACAACAAATCCTAAGAGCATAA 2400 0.3696 MTRVFPTQKKLNVCKEHIHSSRVLQENSMNDSSKFATSIPLTCQKIKDFHPVGVFHGDNPFSHNFVILMLEYILVVTITHIVRFLIKPLRQPKVVSQIIGGVIVGPSVLKRSTWFKHYITTDGAQFLSRNLGIMGFMFFVFIYGVKMDPALIKKTGKMHLYVALVGISIPTIAVFGVALLLRKTMDKDIATNSSIGIIAAYLGITAFPVLYNVLKEFNLLNSDVGRMALAMAIIGDALGVFTVVVFEAGKQGETGPENALWYMVSLVVIIAFVLFCVRPIMIWINDNISEEFPVEQSYAVAILLGALVMGFITDFFGLAIANGPLWLGLVIPDGPRLGATIVQKSETLMTELLIPFSYIMVGSYTDVFAIAGVEWSNLAPLFTMVLTGYFTKFFSTWIAALYWQIPFRDGLTLSLIMSLRGQIDVILFVHMMDKGILKIPGFTLLVLMTTAMTATCTPLISILYDPTRPYMVSQRRNIQHNPSNKDLTIVLCIFDTPSINGLIRLLDISNASLYNPLSVYALRIIELVGRSTPLFIDHVNQEVPHIYRWTHTINSLKHFQELREFVRFQFFTSVSPKKSMFQDICLLSLEQDASLIILPFNKGGGVHNHAIQTVKLQVLDHAPCSVAIFVDKGLLPSTNIRNSHRQYTKHKFAMLFLGGADAREALVYADRMVANPEVSLTVIRFFSHNYLGDNEEERKLDDEIVTSFWVKNELNKGVVYKEVVVRNGEETIAGIQAMNDGSYDLWIVGRKQGINPIFITGLSEWSENEELGLIGDFVSSPDFYGAASVLVVQQQILRA 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1005 799 Pfam Sodium/hydrogen exchanger family 73 454 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lal5g1005 799 Gene3D - 66 469 IPR038770 -
Lal5g1005 799 PANTHER CATION/H(+) ANTIPORTER 24-RELATED 40 798 - -
Lal5g1005 799 PANTHER CATION/H + ANTIPORTER 40 798 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1005 Lal-Chr5 12346242 12349899 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1005 35 796 Antiporter Super Family AT5G37060 42.911 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1005 - - gmx:100783296 968.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1005 5 12346242 12349899 Lal5g1005 5 12346242 12349899 ECH
Lal5g1005 5 12346242 12349899 Lal3g0667 3 5232536 5238820 LSH