Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1001 ATGTCCAAGGTGGTTTGTGTCACCGGAGCCAGCGGTGCCATTGGGTCATGGCTAGTTCGCCTCCTCCTCGAGCGTGGCTACACCGTCCATGCCACCATCCAAGATCTCAAGGATAAGGATGAGACCGAGCATTTGGAGGCAATGGAAGGAGCTAAGAGTCGTCTTCGGCTTTTCCAGATGGATCTTCTTGACAATGACTCCATCGCCGCCGCCATAAAGGGTTGCGCCGGAGTTTTCCACCTTGCATGTCCCAACATCATCGGCCAAGTCAAAGATCCTCAGAAAGAGATTTTGGAACCGGCGATAAAAGGGACAGTTAATGTGTTGAAGGCGGCGAAGGAAGCAGGGGTGGAGCGCGTGGTGGCGACGTCGTCAATCTCCTCCATAATTCCAAGTCCTAACTGGCCAGCTGATAAGATTAAGAATGAGGACTGTTGGACGGACCTCGATTACTGTAGGGAGAAAGGGTTGTACTATCCCATTGCAAAGACTTTAGCAGAGAAAGCGGGCTGGGATTTTGCAAAGGAGACCGGTTTGGATGTAGTGATGATAAATCCTGGCACAGCCTTGGGCCCTCTCATTCCACCAAGAATCAATTCCAGCATGGCCGTGCTTGTTAAGGTTCTCAAAGGTGACAAAGAGACACACGAAGACTTCTTTATGGGAATGACACATTTTAAAGATATAGCCATGGCACATATTTTGGCGTTTGAGAAAAAGAACGCAACGGGAAGGCACTTGTGTGTTGAAGCTATTCGTCACTATGGTGATTTTGTGGCAAAGGTTGCTGAGTTATATCCTGAATATAATGTTGCTACGTTAGAAAAGGATACACAACATGGGTTGTTGAGAGCAAAAGATGCATCAAAGAAGCTGATTGATTTAGGTCTTGAGTTCACTCCAATTGATCAAATTATCAAGGATGCAGTGGAGAGTTTGAAGAGCTTGGGTTATGTCTAA 960 0.4708 MSKVVCVTGASGAIGSWLVRLLLERGYTVHATIQDLKDKDETEHLEAMEGAKSRLRLFQMDLLDNDSIAAAIKGCAGVFHLACPNIIGQVKDPQKEILEPAIKGTVNVLKAAKEAGVERVVATSSISSIIPSPNWPADKIKNEDCWTDLDYCREKGLYYPIAKTLAEKAGWDFAKETGLDVVMINPGTALGPLIPPRINSSMAVLVKVLKGDKETHEDFFMGMTHFKDIAMAHILAFEKKNATGRHLCVEAIRHYGDFVAKVAELYPEYNVATLEKDTQHGLLRAKDASKKLIDLGLEFTPIDQIIKDAVESLKSLGYV 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1001 319 Gene3D - 1 319 - -
Lal5g1001 319 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 3 311 - -
Lal5g1001 319 CDD FR_SDR_e 5 297 - -
Lal5g1001 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 313 IPR036291 -
Lal5g1001 319 Pfam NAD dependent epimerase/dehydratase family 5 245 IPR001509 -
Lal5g1001 319 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1001 Lal-Chr5 12272483 12278989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1001 3 319 Monolignol Biosynthesis Gene Families AT5G58490 66.562 2.22e-167 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1001 - - gmx:100806281 540.806