LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal5g0993	ATGGGGGGTACCTCACCTTGTGCTTCTTGCAAATTATTGAGACGTCGTTGCACCAAGGAGTGTATTTTTGCTCCTTATTTTCCTTCTGATGATCCCCACAAGTTTGCCATTGTTCATAAGGTCTTTGGTGCTAGCAATATCAGCAAAATGCTGCAGGAGCTTCCAGTTCATCAAAGAGCAGATGCTGTAGGTAGTTTAGTTTATGAAGCAAATGCAAGAGTGAGAGACCCAGTGTATGGATGTGTTGGAGCCATATCATTCTTGCAGAGTCAAGTTTCACAATTGCAAATGCAACTTGCAGTGGCACAGGCAGAGATTCTTTGCATCCAGATGCAGCAAGAACCTACTACTTTACCTACACAGTTTGACCAAGATGACAAATCATTGCTCCTATCTTACAACAACAGTAGTAATAACTATGAAATGCTTCCACAATATCTCACTTCCTTTGCTTCATCTTCTTCCTCATCTTCCAATGTATTCCAAGACTCTAATCCTCTTAAAAGAGAGTCTTTTTGGACTTAA	525	0.4076	MGGTSPCASCKLLRRRCTKECIFAPYFPSDDPHKFAIVHKVFGASNISKMLQELPVHQRADAVGSLVYEANARVRDPVYGCVGAISFLQSQVSQLQMQLAVAQAEILCIQMQQEPTTLPTQFDQDDKSLLLSYNNSSNNYEMLPQYLTSFASSSSSSSNVFQDSNPLKRESFWT	174

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal5g0993	174	ProSiteProfiles	LOB domain profile.	5	106	IPR004883	-
	Lal5g0993	174	PANTHER	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	2	171	-	-
	Lal5g0993	174	Coils	Coil	85	105	-	-
	Lal5g0993	174	MobiDBLite	consensus disorder prediction	154	174	-	-
	Lal5g0993	174	PANTHER	LATERAL ORGAN BOUNDARIES (LOB) DOMAIN PROTEIN	2	171	-	-
	Lal5g0993	174	Pfam	Lateral organ boundaries (LOB) domain	6	103	IPR004883	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal5g0993	Lal-Chr5	12232256	12233911	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal5g0993	3	174	AS2 family	AT2G30130	68.783	1.00e-81	238

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	LOB	Lal5g0993		LOB	3.9e-42	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal5g0993	-		-	gmx:100819419	254.218

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal5g0993	5	12232256	12233911	Lal5g0993	5	12232256	12233911	ECH