Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0988 ATGTCTTCACCATTAGAATGCTGGTCCAGCCGCGCCACCACAACCACAACCACCACCAACGACGACGACGACACGGTGGAGCAGCAGGTTCTTATGCGGACGCATCACAGATCCGAATATTCTCCAACACCACCACCCGAACCCGTTAAGGACCCTTCCCTTGTCCAAAAGAAGCTCCACAAACTCACCCGCAACGTTTCTGAAGCTATTGCTTCACTTAAGAACCTTCTGGAACCTTCTAATAATAAGATGGAACCTTCTAGAAAACTAATGTGGGGAATTGCTTTGAGGAATTTGACTCAGCTTTACCCTGGAAGCCAGCTCCCTGAGAAACTCTTGTCTAACATTCGCAAACACTATGATTCTTTGCCTCTCAGTTATTCTCAAGCGGCGTTTGATGTGAAAGATGTTTTTCTTCACATCAAGTTGATGGAGCAAGCTTTGGAAGATGACCAACCTGCAATTTTGATTCAAGAGGAGTGTGATGATGAGATTCAGCTTCAGGGGTCTATGTTCAAGTTGACATTTGCTTGCAACTCTCCCATCTCATGGCCTGCAATGTCAGGTGCATTGGACAGTTCATCCATTTGCTGTAAGAAGATTCAGATCTATGAGAAGAAAGGTTCCACCCTTGGGATTGTTCTTCTCCTTGTTCTGTCTGGGGCTGGCCAAGATAAGTCGGTCAGAACTAAGGTTGAAAGTGCTCTCAAGTTTGCCATGAAGAAGCCAAAAACAAATTCTGTGAAGCTTCCCTTTGGGCTATGTGGATGTCAAGAGGAGAACTCCAAGAAAAGAGAACCCGGAGAGATTGAAGAAGACAGCGGTAACCCATGCTATGGAAATGGGTTTGATAAATTGACCCAAAATATTCATCTTCAGGTGCCCTTGCCTTGTTCATCTTTTGTTGTAGCAGTGGATGAATGGCAGACTATACAGTCAGGTGGGAATGAGATAGAGAAATGGTTGTTGAGCGCAGAAAGTCTTGAGTTTGGAGAACTGATTGGGCCAAATTCTTATAAAGGGATATACATGGGTAAAAAAGTTGCAATTGAGAAGCTTAGAGGGTGTGACAAAGGTAATTCCTATGTGTTTGAGCTCAGGAAAGATCTGCTGGAACTGATGACTTGTGGCCATAAAAATATGATGCAGTTCTGGGGTGTTTGTGTAGATGAGAATCATGGGTTATGTGTAGTAACGAAATTCATGGAAGGTGGATCTGTTCATGACTTGATGTTAAAGAACAAGAAGCTTCAGAGTAAGGATATTGTAAGAATTGCAGTTGATGTTGCTGAGGGAATCATGTTTATGAATGATCATGGTGTTGCATACAGAGACCTTAATATACAGAGAATTCTGTTGGACAGGCATGGGAATGCTTGTTTGGCAGATATGGGTATAGTCACAGCCTGCAAGAGTGTTGGAGAGGCAATGGATTACGAGACTGATGGTTATCGGTGGCTAGCTCCAGAGATAATTGCTGGTGACCCAGAGAGTGTGACAGAGACATGGATGAGTAATGTTTATAGTTTTGGAATGGTAATTTGGGAGATGGTAGCCGGTGAAGCAGCGTATTCTGCATATTCACCTGTGCAGGCAGCGGTGGGCATTGCCGCTTGCAGCCTTAGACCTGAGATCCCTAAGGACTGTCCACAAACTTTAAAATCCCTTATGACAAAATGCTGGAACAACACGCCTTCGAAGCGTCCCCCGTTCTCTGAAATTTTAGCTTTGTTGCTGCGACCAAAATAA 1749 0.4414 MSSPLECWSSRATTTTTTTNDDDDTVEQQVLMRTHHRSEYSPTPPPEPVKDPSLVQKKLHKLTRNVSEAIASLKNLLEPSNNKMEPSRKLMWGIALRNLTQLYPGSQLPEKLLSNIRKHYDSLPLSYSQAAFDVKDVFLHIKLMEQALEDDQPAILIQEECDDEIQLQGSMFKLTFACNSPISWPAMSGALDSSSICCKKIQIYEKKGSTLGIVLLLVLSGAGQDKSVRTKVESALKFAMKKPKTNSVKLPFGLCGCQEENSKKREPGEIEEDSGNPCYGNGFDKLTQNIHLQVPLPCSSFVVAVDEWQTIQSGGNEIEKWLLSAESLEFGELIGPNSYKGIYMGKKVAIEKLRGCDKGNSYVFELRKDLLELMTCGHKNMMQFWGVCVDENHGLCVVTKFMEGGSVHDLMLKNKKLQSKDIVRIAVDVAEGIMFMNDHGVAYRDLNIQRILLDRHGNACLADMGIVTACKSVGEAMDYETDGYRWLAPEIIAGDPESVTETWMSNVYSFGMVIWEMVAGEAAYSAYSPVQAAVGIAACSLRPEIPKDCPQTLKSLMTKCWNNTPSKRPPFSEILALLLRPK 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0988 582 MobiDBLite consensus disorder prediction 1 52 - -
Lal5g0988 582 ProSiteProfiles Protein kinase domain profile. 328 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g0988 582 MobiDBLite consensus disorder prediction 1 25 - -
Lal5g0988 582 PRINTS Tyrosine kinase catalytic domain signature 399 412 IPR001245 GO:0004672|GO:0006468
Lal5g0988 582 PRINTS Tyrosine kinase catalytic domain signature 435 453 IPR001245 GO:0004672|GO:0006468
Lal5g0988 582 PRINTS Tyrosine kinase catalytic domain signature 505 527 IPR001245 GO:0004672|GO:0006468
Lal5g0988 582 PRINTS Tyrosine kinase catalytic domain signature 549 571 IPR001245 GO:0004672|GO:0006468
Lal5g0988 582 Gene3D Transferase(Phosphotransferase) domain 1 322 580 - -
Lal5g0988 582 SUPERFAMILY Protein kinase-like (PK-like) 311 578 IPR011009 -
Lal5g0988 582 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 581 - -
Lal5g0988 582 PANTHER SERINE-THREONINE PROTEIN KINASE 1 581 - -
Lal5g0988 582 Pfam Protein tyrosine and serine/threonine kinase 346 577 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0988 Lal-Chr5 12139016 12143535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0988 306 578 MAP Kinase Kinase Kinase AT2G17700 34.783 6.42e-50 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Lal5g0988 PK_Tyr_Ser-Thr 2.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0988 - - pvu:PHAVU_008G258400g 907.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0988 5 12139016 12143535 Lal5g0988 5 12139016 12143535 ECH
Lal5g0988 5 12139016 12143535 Lal18g1250 18 15175012 15185238 PCT
Lal5g0988 5 12139016 12143535 Lal22g0344 22 2191700 2195268 PCT
Lal18g1250 18 15175012 15185238 Lal5g0988 5 12139016 12143535 PCT
Lal22g0344 22 2191700 2195268 Lal5g0988 5 12139016 12143535 PCT