Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0984 ATGTTTCATCTCAAAATGAAAGAAACGTGGAGGTTGAACTGGTTAAAGCTCTATCGCATGGTGTTGTTGTTGGTGATGCTGCCTCTGTTTCCGTTCAGCATGAAACAAACTCAATGTTCTAATCTGAACACCGAAGGGTTGGCACTGCTAAGGATGAAGGAGAATGTGGTGAGAGAATCATTGGGAGCTTTATCGAGTTGGAATGACGAAGATGGAGTCATTGATCCATGTTCATGGTTAGGAGTTGAGTGCTCTTATGGCAATGTTGTAACCTTCATTTTGCGCAACAATTCTTTCTATGGAGACATTCCTAAGGAGATACTACAATTAAAGGAACTTGAAGTTCTTGACTTAGGATATAACAACTTTAGTGGATCATTTCCATCTGATTACCTTAGCAGCAATCCATCCCTGACTATTCTTTTATTGGACAACAATGATTATCTTGACAACTTATCTCCAGAAGAGTATAATCTCAAAATGATTTCTGAATTACATGTACATGAAAAACAGCTATTTGGTCCAACTACTAGACAAGCATGTGTTAGCAGATCTAGTTTCTGGCACATTGCAGAACATGGGGATGTTGCACAAAAGCGGCAACTTCTCGAAGCAGCAAATGCTGTTAACACACACAAAACTAATACGGTTGGTGATAAGCGCACTGTTTCATCATCACCATCACCATCACCATCACCATCGTCATCACCTTTCCCCTCATCATTATCACCACATTCTGAACCTTTCTCATCATCAGAAAGTAGTCCCTCAAATTCACCATTAGTATCTATCACGTCATCGTTTTTGCCACCGCCATTGAGATCTCCAGAAGTTTCTCCTTCACCATCTCCCTATCCCTCCAATATCATTTTCGATCTTTCAAACTCACGTTCACCTTTGGTGGCGCCCACACCAGACATAACACTTTCAAAAAATCCATCCACTGTTGTGTCTGCTCCTGCTCCGTCTCCGATCGAAGGGAGTTTAAGCAATTCAAAGCGAAAGCAACATTTTGTGATTATTTGGTCTACAGTAGGAGGCTTCTCCTTTGTTTTGGTGTCAGTGATTGCTTTTGTTTGCTTCAGAAGTAGTAAAGTTGTAACAGTAAAACCTTGGGCCACAGGGTTGAGTGGCCAGCTTCAGAAAGCATTTGTAACAGGTGTTCCAAGTCTGAAACGCGCAGAACTTGACGCAGCTTGTGAAGATTTCAGTAACATTATCGGTTCTCTTCCAGATGGGACTGTTTTCAAGGGGACTCTCTCTAGTGGAGTTGAGATAGCTGTAGTATCCTCTGCAGTTACTTCATCTCAAAACTGGTCAAAAAATATGGAAGCTCAATTCCGAAAAAAGATAGAGGCATTGTCGCGAGTGAACCACAAGAATTTTGTGAATCTTATTGGGTACTGTGAAGAGAATAAGCCATTTACAAGGATGATGGTTTTTGAGTATGCTCCAAATGGAACACTGTTTGAACATCTACACATTAGAGAAGTGGAACAATTAGACTGGGGTATGAGAATGAGGATAGCAATGGGAATAGCCTACTGTCTAGAGCATTTGCATAATCTGAAACCACCCATTTCCCACAGAAACCTGCTATCTTCATCGATATACCTGACCGAAGATTATGCTGCTAAACTATCAGACCTTAGTTTCTGGAATGACACAGTTTCTACAAATAATGGTTCTGAAGCAAAACATCACTTGGAAACAACTTCAGCATATATAAAGGGAAATGTATATAGCTTTGGTGTAATATTGTTGGAATTGATAACAGGGAAAGTTCCCTATGCTGTGGACAATGGTTTTCAAGTAGATTGGGCAGAAGAATACATAAATGGGCAACCTTTGAAAGAATTGGTGGATAAAAGTTTGGTCACTTTGAAAGGAAATGAAGTTGAGAAATGGTGTGAAGTGATTAAAAATTGTGTAAATCCAGATGCAGAAAAAAGGCCAACAATGAGAGAGGTTAGTAATAAGTTGAAGGAAATTACTGCTATGGGGCCTGATGGAGCAACTCCAAAATCATCAACTCTTTGGTGGGCAGAGTTAGAAATAATAAGTTGA 2067 0.4006 MFHLKMKETWRLNWLKLYRMVLLLVMLPLFPFSMKQTQCSNLNTEGLALLRMKENVVRESLGALSSWNDEDGVIDPCSWLGVECSYGNVVTFILRNNSFYGDIPKEILQLKELEVLDLGYNNFSGSFPSDYLSSNPSLTILLLDNNDYLDNLSPEEYNLKMISELHVHEKQLFGPTTRQACVSRSSFWHIAEHGDVAQKRQLLEAANAVNTHKTNTVGDKRTVSSSPSPSPSPSSSPFPSSLSPHSEPFSSSESSPSNSPLVSITSSFLPPPLRSPEVSPSPSPYPSNIIFDLSNSRSPLVAPTPDITLSKNPSTVVSAPAPSPIEGSLSNSKRKQHFVIIWSTVGGFSFVLVSVIAFVCFRSSKVVTVKPWATGLSGQLQKAFVTGVPSLKRAELDAACEDFSNIIGSLPDGTVFKGTLSSGVEIAVVSSAVTSSQNWSKNMEAQFRKKIEALSRVNHKNFVNLIGYCEENKPFTRMMVFEYAPNGTLFEHLHIREVEQLDWGMRMRIAMGIAYCLEHLHNLKPPISHRNLLSSSIYLTEDYAAKLSDLSFWNDTVSTNNGSEAKHHLETTSAYIKGNVYSFGVILLELITGKVPYAVDNGFQVDWAEEYINGQPLKELVDKSLVTLKGNEVEKWCEVIKNCVNPDAEKRPTMREVSNKLKEITAMGPDGATPKSSTLWWAELEIIS 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0984 688 Pfam Leucine rich repeat N-terminal domain 43 85 IPR013210 -
Lal5g0984 688 SUPERFAMILY L domain-like 58 175 - -
Lal5g0984 688 Gene3D Transferase(Phosphotransferase) domain 1 484 670 - -
Lal5g0984 688 Gene3D Ribonuclease Inhibitor 45 178 IPR032675 -
Lal5g0984 688 MobiDBLite consensus disorder prediction 239 263 - -
Lal5g0984 688 MobiDBLite consensus disorder prediction 209 229 - -
Lal5g0984 688 MobiDBLite consensus disorder prediction 209 263 - -
Lal5g0984 688 SUPERFAMILY Protein kinase-like (PK-like) 392 661 IPR011009 -
Lal5g0984 688 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 6 688 - -
Lal5g0984 688 ProSiteProfiles Protein kinase domain profile. 401 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g0984 688 PANTHER PROTEIN MALE DISCOVERER 2 6 688 - -
Lal5g0984 688 Gene3D Phosphorylase Kinase; domain 1 377 483 - -
Lal5g0984 688 Pfam Protein tyrosine and serine/threonine kinase 405 661 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0984 Lal-Chr5 12086003 12091703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0984 395 668 Trihelix Transcription Factor Family AT1G70460 35.117 1.11e-37 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lal5g0984 PK_Tyr_Ser-Thr 2.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0984 - - gmx:100814122 832.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0984 5 12086003 12091703 Lal3g0418 3 2895326 2900663 LSH