Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0972 ATGGGTTTGGGATTCAAAGAATTCATAATCCGAAGCTATGAAGGCCAATCTGATAGATCTCAAGTGGAAGATCTTGAGAGAAGATGTGAGGTAGGACCAGCTGAAAGTGTGTTCCTCTTCACAGACACTATGGGTGACCCCATTTGTAGGATCCGAAATAGTCCTATGTTCATGATGCTGGTGGCAGAATTGGGTAATGAATTGGTTGGTGTAATTCAAGGCTCTATAAAAGTGGTCACTATTCATAGTTGTCCTCCAATGGGTTTGGCAAAGGTGGGGTATGTCCTTGGCCTAAGGGTTGTTCCTCATCATAGGAGAAAAGGGATTGGGTCAAGCTTAGTGCAAAGGCTAGAAGAATGGTTCATTTCCAATGATGTGGATTATGCATATATGGCCACAGAGAAAGATAACCATGCCTCGGTTAGTCTCTTCATGGACAAATTTGGCTACACCAAGTTCCGAACACCGGCGATACTCGTAAACCCGGTGAACCATCATTGCTTTCAAATCTCATCCAACATTGAGATAGCAAGGTTGAAGATTGAACAAGCTGAATCCCTCTATAGAAGATTCATGAGCTCCACTGAGTTTTTTCCTAATGACATAGACAATATACTTAGGAATAAGCTAAGTTTGGGGACATGGGTGGCATATTTCAAAGGAGATAGTGATTTTGGGTCAAATGGACAAGTCCCAAGTAATTGGGCCATGCTTAGTGTATGGAATAGTGGGGAAATCTTCAAACTAAGGCTAGGGAAAGCACCTTTTTCTTGCTTGCTATACACAAAGAGTTGGGGCTTTATTGATAAGATTTTCCCATGCTTCAAATTGCCTACTTTACCTGATTTCTTCAACCCATTTGGGTTCTATTTCATGTATGGTGTGTACCATGAAGGTCCATTCTCAGGGAAGCTTGTGAGGGCCTTGTGTCAATTTGTGCACAACATGGCTTCAAAGTCTAAGGATGAAAATTGCAAAATCATTGTGACTGAAGTTGGAGGAAGAAATGAGCTCAACAATCATATCCCACATTGGAAATTGCTCTCTTGCCCTGAAGACTTGTGGTGCATAAAGGCCTTGAAAAATGAAGGGACAAATACCCTCCATGAATTAACCAAAAACCCACCAAGAATAGCTCTCTTTGTAGACCCAAGAGAGGTCTAA 1164 0.4175 MGLGFKEFIIRSYEGQSDRSQVEDLERRCEVGPAESVFLFTDTMGDPICRIRNSPMFMMLVAELGNELVGVIQGSIKVVTIHSCPPMGLAKVGYVLGLRVVPHHRRKGIGSSLVQRLEEWFISNDVDYAYMATEKDNHASVSLFMDKFGYTKFRTPAILVNPVNHHCFQISSNIEIARLKIEQAESLYRRFMSSTEFFPNDIDNILRNKLSLGTWVAYFKGDSDFGSNGQVPSNWAMLSVWNSGEIFKLRLGKAPFSCLLYTKSWGFIDKIFPCFKLPTLPDFFNPFGFYFMYGVYHEGPFSGKLVRALCQFVHNMASKSKDENCKIIVTEVGGRNELNNHIPHWKLLSCPEDLWCIKALKNEGTNTLHELTKNPPRIALFVDPREV 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0972 387 Pfam Acetyltransferase (GNAT) family 49 150 IPR000182 GO:0016407
Lal5g0972 387 Gene3D - 16 157 - -
Lal5g0972 387 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 387 - -
Lal5g0972 387 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 8 164 IPR000182 GO:0016407
Lal5g0972 387 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 387 - -
Lal5g0972 387 CDD NAT_SF 59 130 - -
Lal5g0972 387 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 154 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0972 Lal-Chr5 11925805 11927943 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lal5g0972 Acetyltransf_1 1e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0972 - - gmx:100799507 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0972 5 11925805 11927943 Lal5g0972 5 11925805 11927943 ECH