Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0926 ATGGCAACCATTGCTACCTTCTTCAACAAGTTCCTCTCTCTTTTCCTCATCCTCATTGTTCACCTTGGTTGTTTCATCTTCATCAAACAAGAAAATCTACCATCAAAGAAACGCAAAACCCCATCTTTATCTTTTTCCCACACCAAATTTAAGACCCACAAAGCCCTTTCTTCTTCTTGGCATTTCATCAAACACATCTTCTCCTCAAAATCAAGCAAGATCACAAACACCACAATTTCATCGCCGCAATCCACAACCACCGCCACCACCGCCACACAATCTTTAATCTCTTGCAGGTCTTCCAAGGCACAGCAAGAATTTGATTTCCCATATCCTAGAAAAAGAACTGGGTCCGGGGGGTCATGCCCCGAATCCGATATCTCCGCCGTCAACAACCACTTCTTCCCCCTCCGCAATGACATCTTCCCATGCACCGTGTGCGGCGAGGTTTTCCAAAAGCCCAACCTCCTCGATCAGCACCAGACCACCAACCACGCTGTATCAGATCTTGCAGGATCCGACCCGGGTCACAATATCGTTCAGATAATATTCAAGTCGGGTTGGCCAGAGACCCGTATTCTTCCTGTCAAAACCCGGATCCTGAAGATCCATAACAGCCCTAAAATCCTCTCCAAATTCGAGGACTACCGTGAGAGGGTGAAGGCCAAGGCTGCGCGTAATAGCACGCGCTGCCGTGATGAACGGTGCGTCGCTGACGGAAACGAGCTCATGCGGTTCCACTGTTCCACGTTTCTTTGCGACTTGGGACTCAACGGGAATTCTAAAACTTGTTCGCAGCAATTTTGTAATATTTGTTGTATCATTAAATCAGGTTTTTCGCCCAAGCTAGATGGCATATCGACGATGTCATCTAGCTGGAGGGCACATGTGTCAATACCCGATGACATGGAGCAAGAGTTCCGTTTCATGAATGTGAAGCGGGCTATGCTCGTTTGTCGGGTAATTGCAGGCCGGGTTGGATCGGATTTGGATGAAGTCAATAAAGAGGATGGAGGGTTTGATTCACAGATAGCGCGTGGTGGGAGTGGAGTTTACACCAGGTTTGACGACGAGGAGTTGTTAGTGTTTAATCCTAGGGCTGTGCTTCCTTGCTTTGTGATTGTGTATAGTGTGTAA 1137 0.4758 MATIATFFNKFLSLFLILIVHLGCFIFIKQENLPSKKRKTPSLSFSHTKFKTHKALSSSWHFIKHIFSSKSSKITNTTISSPQSTTTATTATQSLISCRSSKAQQEFDFPYPRKRTGSGGSCPESDISAVNNHFFPLRNDIFPCTVCGEVFQKPNLLDQHQTTNHAVSDLAGSDPGHNIVQIIFKSGWPETRILPVKTRILKIHNSPKILSKFEDYRERVKAKAARNSTRCRDERCVADGNELMRFHCSTFLCDLGLNGNSKTCSQQFCNICCIIKSGFSPKLDGISTMSSSWRAHVSIPDDMEQEFRFMNVKRAMLVCRVIAGRVGSDLDEVNKEDGGFDSQIARGGSGVYTRFDDEELLVFNPRAVLPCFVIVYSV 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0926 378 PANTHER NUCLEIC ACID BINDING PROTEIN 3 377 - -
Lal5g0926 378 ProSitePatterns Zinc finger C2H2 type domain signature. 144 165 IPR013087 -
Lal5g0926 378 SUPERFAMILY ADP-ribosylation 169 377 - -
Lal5g0926 378 Gene3D - 194 378 - -
Lal5g0926 378 ProSiteProfiles Zinc finger C2H2 type domain profile. 142 166 IPR013087 -
Lal5g0926 378 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 3 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0926 Lal-Chr5 11149232 11150368 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0926 60 378 C2H2 Transcription Factor Family AT2G29660 51.057 8.53e-99 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal5g0926 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0926 - - gmx:100785244 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0926 5 11149232 11150368 Lal5g0926 5 11149232 11150368 ECH