Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0897 ATGCAAATGAAGAAAAAAACATCAGGCAATGGCACAAATAACAACAAGAATCATAGTACCCTGACATATTTAAAATCTGCTGCAAAAAAATGTGCAGAAGTTTTTACATTCTTTCTCCATGGGAAAAGAAAAACAACCTCAGAAGTTGTTGAAAGTGATGAGAGGGAGAATACACACAAAGTTAGAGAGTCATCATCTGCAACAGATTTATCATCTGGTAATAGTAACAAGGATTCATCGAAATCGAACTTTTCTCATTCGAATGCATCATCTAGCACTTCAAGTACTCAGCTTGGGCCTGGCAACTTTTCATTTGAAGAAATTTACAAGGCAACGGCGAAATTTTCTCCTGAAAATAAGATTGGGGAAGGTGGTTTTGGAACAGTATATAAGGGAAAGCTTAGTAATGGACCTCTTGTCGCTGTAAAGCGCGCCAAGAAGGATGTAGAAAATAAGCACTTATCTGAATTCAAGAATGAAATATGTACATTGTCAAGAATTGAGCACCTAAATCTTGTGAGGTTGTACGGATATGTGGAGCATGGAGATGAAAAGATTATTGTTGTTGAGTATGTTAATAATGGGACACTTCGGGAACATTTAAATGGTACGCGAGGACATGGACTAGAAATTGGTGAGCGTCTAGACATAGCAATTGATGTAGCTCATGCAGTTACTTACCTCCATATGTACACAGATCATCCAATTATACATAGAGACATCAAAGCATCAAACATTTTAATCACTGACAATCTTAGGGCCAAAGTTGCAGACTTTGGTTTCGCTCGGTTGGCTGCCAAAGATCCGGATGCGACCCATATTTCAACTCAAGTTAAAGGAACACTTGGATATGTGGATCCTGATTACATGCGAACACGTCATCTAACTGAAAAGAGTGATGTTTATTCCTTTGGTGTGTTGCTTGTTGAAATGATCACCGGACGATATCCGATTGAACCAAAGAGACAACACAATGAGATAGTGACAATTAGATGGGCATTAGAGATGTGGAAACAAGGAGAAGTTTTGATTGCCATGGATCCGAAACTGCGAAGAAGTTCAGCCTCAAACAAGGCAATAGAGAAGGTTTTCAGGCTAGCTTATCAATGTCTTGCACCAGCAAGAAAATTAAGGCCATCCATGAAGACTTGTGCTGAGGTTTTATGGGGAATCCGTAAAGATTTTAGAGATAAAACCTTCCCTCATTCTCCCATTGATTCTAACCATTCTCCAAAGTATATTGAGAGGGATGTTAAGAATAATAAGCATAAGCCATTTGTCTCTGCATAA 1290 0.386 MQMKKKTSGNGTNNNKNHSTLTYLKSAAKKCAEVFTFFLHGKRKTTSEVVESDERENTHKVRESSSATDLSSGNSNKDSSKSNFSHSNASSSTSSTQLGPGNFSFEEIYKATAKFSPENKIGEGGFGTVYKGKLSNGPLVAVKRAKKDVENKHLSEFKNEICTLSRIEHLNLVRLYGYVEHGDEKIIVVEYVNNGTLREHLNGTRGHGLEIGERLDIAIDVAHAVTYLHMYTDHPIIHRDIKASNILITDNLRAKVADFGFARLAAKDPDATHISTQVKGTLGYVDPDYMRTRHLTEKSDVYSFGVLLVEMITGRYPIEPKRQHNEIVTIRWALEMWKQGEVLIAMDPKLRRSSASNKAIEKVFRLAYQCLAPARKLRPSMKTCAEVLWGIRKDFRDKTFPHSPIDSNHSPKYIERDVKNNKHKPFVSA 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0897 429 SUPERFAMILY Protein kinase-like (PK-like) 90 391 IPR011009 -
Lal5g0897 429 MobiDBLite consensus disorder prediction 64 98 - -
Lal5g0897 429 ProSitePatterns Protein kinases ATP-binding region signature. 121 147 IPR017441 GO:0005524
Lal5g0897 429 PANTHER OS02G0821400 PROTEIN 9 403 - -
Lal5g0897 429 Gene3D Phosphorylase Kinase; domain 1 74 191 - -
Lal5g0897 429 ProSiteProfiles Protein kinase domain profile. 115 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g0897 429 SMART serkin_6 115 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g0897 429 MobiDBLite consensus disorder prediction 45 63 - -
Lal5g0897 429 Gene3D Transferase(Phosphotransferase) domain 1 192 407 - -
Lal5g0897 429 MobiDBLite consensus disorder prediction 45 98 - -
Lal5g0897 429 Pfam Protein tyrosine and serine/threonine kinase 118 388 IPR001245 GO:0004672|GO:0006468
Lal5g0897 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Lal5g0897 429 PANTHER OS01G0253100 PROTEIN 9 403 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0897 Lal-Chr5 10668687 10678138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0897 103 391 Receptor kinase-like Gene Family AT1G30570 43.945 1.57e-68 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Lal5g0897 PK_Tyr_Ser-Thr 2.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0897 - - gmx:100819818 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0897 5 10668687 10678138 Lal5g0897 5 10668687 10678138 ECH