Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0858 ATGCCGACATCGCTCACCCTCGCCGTAGTCCCCACCGTCTCCCCCAGACTCCTCCAACGTCAGAGTTCCGATCGCATTAGCCTTCGCCGTATCTCTCTCAGTGTTGTGGCGACGGCGACAGAGGCTGAGTCAGGAAAGATGGAATCACGGCGGTCGACGGCGAGCCTCTACGAAGTGCTGCGGGTGGAGAAGGACGCGTCGACGATGGAGATTAAGTCAGCTTATCGGAGCTTGGCGAAAATCTACCACCCCGACACGGTGGTGAAACGGCTACCGGAGTATGACAATGGCAGGGAATTCATCGAGATCAGAAACGCGTATGAGGCGCTTTCGGATCCATCGGCAAGAGCGATGTACGATCTATCGCTGATGGCGGCTCACGGCGGAAGGAACAGCCGTTTTGCGAGACCTTTGGGCATGAACCTAAGTTCTGAGTTTTACACGACCGGAAGATGGGAAACGGACCAATGCTGGTAG 477 0.5639 MPTSLTLAVVPTVSPRLLQRQSSDRISLRRISLSVVATATEAESGKMESRRSTASLYEVLRVEKDASTMEIKSAYRSLAKIYHPDTVVKRLPEYDNGREFIEIRNAYEALSDPSARAMYDLSLMAAHGGRNSRFARPLGMNLSSEFYTTGRWETDQCW 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0858 158 ProSiteProfiles dnaJ domain profile. 55 123 IPR001623 -
Lal5g0858 158 SMART dnaj_3 54 115 IPR001623 -
Lal5g0858 158 SUPERFAMILY Chaperone J-domain 52 129 IPR036869 -
Lal5g0858 158 Pfam DnaJ domain 56 120 IPR001623 -
Lal5g0858 158 Gene3D DnaJ domain 39 135 IPR036869 -
Lal5g0858 158 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 17 158 - -
Lal5g0858 158 ProSitePatterns Nt-dnaJ domain signature. 100 119 IPR018253 -
Lal5g0858 158 PRINTS DnaJ domain signature 57 75 IPR001623 -
Lal5g0858 158 PRINTS DnaJ domain signature 75 90 IPR001623 -
Lal5g0858 158 PRINTS DnaJ domain signature 95 115 IPR001623 -
Lal5g0858 158 CDD DnaJ 57 112 IPR001623 -
Lal5g0858 158 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 17 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0858 Lal-Chr5 9800687 9801163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0858 49 120 C2H2 Transcription Factor Family AT1G74250 45.946 1.40e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0858 - - gmx:100778445 163.696