Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0849 ATGTTTTCCACGAAGTGCCTAATAACTTCAGAGGCACAAGAAACATTAGGGTCGAACCAGGGCCCTGATGACTCGAGAATCCTCCCTGGAATAGATGGTTATGATGGGTGTTTGTGTGATGTTAGTATTGATGTGTTTGGGGATGGGGTGAATTCATTGTTGCTCGGTCAAGTTGTCTTGGATGTAGTGGATGAGCAGGTTGCTATCACCATGGGTCAGGAATTCGTTTACTCTGATCAAGATCCGGTGATAATCGATATGGGTTTCTTGATAACGACGCTAATCTTCGTTGTGGTTGGGATAATCGTGTGCCTCTGTACCAGAATTTGCTGCAATAGAGGACCTTCTGCTAATCTATTTCACCTAACTTTGGTTATTACTGCAACAATATGCTGCTGGATGATGTGGGCAATTGTTTATATGGCGCAGATGAAACCGCTCATAGTACCTATATTGAATGAGGGCGAATAA 471 0.4331 MFSTKCLITSEAQETLGSNQGPDDSRILPGIDGYDGCLCDVSIDVFGDGVNSLLLGQVVLDVVDEQVAITMGQEFVYSDQDPVIIDMGFLITTLIFVVVGIIVCLCTRICCNRGPSANLFHLTLVITATICCWMMWAIVYMAQMKPLIVPILNEGE 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0849 156 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT H 87 156 IPR008389 GO:0033179|GO:0046961|GO:1902600
Lal5g0849 156 Pfam ATP synthase subunit H 89 153 IPR008389 GO:0033179|GO:0046961|GO:1902600
Lal5g0849 156 PANTHER V-TYPE PROTON ATPASE SUBUNIT E2 87 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0849 Lal-Chr5 9601304 9605689 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0849 87 156 Primary Pumps ATPases(2) AT5G55290 85.714 3.70e-39 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0849 K02153 - gmx:100527598 146.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0849 5 9601304 9605689 Lal5g0849 5 9601304 9605689 ECH