Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0801 ATGAGCGATTCTGCATACAGAGTTGAAACCACTTCACGCCTTGCTCAATGGAAAATCGAAAACTTGTCTTCTTGTACTTACCGCAAATCCGATCCTTTCAAAATCGGAAAATGGAATTGGCATTTGTCAGTGGAGAAGAACAGGGTTTTGTATGTTAAATTATACCCAGAAATATCAAATTTAACAAGAGACAATCCTCCAATTGCATCTTTCATCATTCGGGTGGTTAGTTCTGTTGGAGATCGTAAGGCCCTCGCACATCCAGAAATAAAGGAAAAGTTACTAAAGAACAACGAGGATTTTGTTTGGGCAGTTGAGGTTCCTCTAACTGGAAAATTCATTATTGAAGTTGAGTTCCTTGATTTGAAGACCACATCCCCCAACGGTGAAGAACCTTATTCCATCTTTGCTGATGGATTTACTCAGAAAAGATTAAATGAAAAAGCCGTCGAGTCTCTCGGTAGAATGCTAACAGAAGGAATACACACAGACATCACGATCAATGCTTCTGATGGAAGCATAGGAGCTCATCGAGCTGTTCTTGCAGCCCGCTCGCCTGTCTTTTGCAGCATGTTCTCACATAATCTTCAGGAGAAAGAGCTGTCTACCATAAACATCCCAGATATGTCAATTGAATCTTGTCAAGCTTTTCTCAATTATCTTTATGGGATCATCAAACATGAAGAATTTCTTATGCATAGGCTTGCCCTTCTACATGCAGCTGACAAGTATGACATATCTGACTTGAGAGACACATGCCATGAGAGTCTTTTGGAAGATATTGATGCAACAAATGTACTTGAGAGGCTCCAAAATGCATCGCTATATCGATTAATGAAACTGAAGATGAGCTGTATTTGTTATCTTGTGAAGTTTGGTAAAATATTTGACATTCGGGATGATTTCAATACCTTCCTGCAAAATGCAGACAGGGATCTGATTGCGGAAGTCTTCCATGAAGTACTTGTTGCGTGGAAAGGATTCTGA 987 0.3982 MSDSAYRVETTSRLAQWKIENLSSCTYRKSDPFKIGKWNWHLSVEKNRVLYVKLYPEISNLTRDNPPIASFIIRVVSSVGDRKALAHPEIKEKLLKNNEDFVWAVEVPLTGKFIIEVEFLDLKTTSPNGEEPYSIFADGFTQKRLNEKAVESLGRMLTEGIHTDITINASDGSIGAHRAVLAARSPVFCSMFSHNLQEKELSTINIPDMSIESCQAFLNYLYGIIKHEEFLMHRLALLHAADKYDISDLRDTCHESLLEDIDATNVLERLQNASLYRLMKLKMSCICYLVKFGKIFDIRDDFNTFLQNADRDLIAEVFHEVLVAWKGF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0801 328 Gene3D Potassium Channel Kv1.1; Chain A 141 291 IPR011333 -
Lal5g0801 328 Pfam BTB/POZ domain 156 259 IPR000210 GO:0005515
Lal5g0801 328 PANTHER OS08G0495500 PROTEIN-RELATED 1 328 IPR044714 -
Lal5g0801 328 CDD MATH 17 119 IPR002083 GO:0005515
Lal5g0801 328 SUPERFAMILY TRAF domain-like 13 85 - -
Lal5g0801 328 SMART BTB_4 163 261 IPR000210 GO:0005515
Lal5g0801 328 ProSiteProfiles BTB domain profile. 163 222 IPR000210 GO:0005515
Lal5g0801 328 CDD BTB_POZ_ZBTB_KLHL-like 162 244 - -
Lal5g0801 328 SUPERFAMILY POZ domain 147 259 IPR011333 -
Lal5g0801 328 PANTHER OS08G0495500 PROTEIN 1 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0801 Lal-Chr5 8153156 8156039 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lal5g0801 BTB 3.8e-22 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0801 K10523 - gmx:100790186 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0801 5 8153156 8156039 Lal5g0801 5 8153156 8156039 ECH