Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0796 ATGTTTTCTTTAACACTCACAAATGGGGTTCCTTCAAAATCTCACTTTTCTAACCGAACCCATCATTTTCATCGAACACATCATTTCCTTCACTTTCCATTGATAAAAAACCCTTCACCTATTCGGTGCGGTATCCGAGAGCTTCGAGAGCGAATCGAAACTGTGAAGAATACCCAAAAGATCACTGAAGCGATGAAGCTTGTCGCCGCTGCAAGGGTCCGCCGAGCCCAAGAAGCAGTCATCAATGGAAGACCCTTCTCACAGACACTTGTTGAAGTGTTGCAAGATATCAACCAAAGGCTCCGAATTGAAGATATCGATGTCCCCCTCACCAACGTTAGACCCGTTAAGAAGGTTGCCCTTGTTGTCATAACCGGTGACCGTGGTCTTTGTGGCGGTTTCAATAATGCAGTGGCGAAAAAAGCGGAGACCAGAATCAGAGAATTGAAGAGTGTTGGTTTGGATTGTGTTGTTATTAGCGTTGGCAAAAAGGGTAATTCATTTTTCAAGAGTAGGAATTTTGTTCATGTTGATAGGTTTATTGAAGGGGGGAGTTTTCCAACTACAAAGGAAGCTCAAGCTATAGCAGATGATGTTTTTGCTTTGTTTGTTAGTGAGGATGTTGATAAGGTTGAGCTTGTGTACATGAAGTTTGTGTCTTTGGTTAAGTTTGATCCCGTGATTCATACATTGTTGCCATTGTCAACAAAAGGAGAGGTTCGTGACGTGAACGGGAATTGTGTTGATGCAATGGAGGATGAGTTTTTCAGGTTGACTACTAAGGAAGGAAAATTGGCTTTGGAGAGGGATGTTGTGGATAGGAAGAGAGGTGAATGCTTGCCACTTATGCAATTTGAGCAAGATCCAGTTCAGATTCTTGATGCTATGATGCCTCTTTATCTGAACAGTCAGATTTTGAGGGGCTTGCAAGAATCACTGGCTAGTGAGCTTGCTGCAAGAATGAATGCCATGTCTAATGCCACTGAAAATGCAATTGAGTTAAAGAAGAATCTCTCAATGGCCTACAACCGGCAACGACAGGCAAGGATCACAGGGGAGCTGTTAGAGATTGTGGCTGGAGCTGAGGCACTAACACCAATTGATTGA 1107 0.4318 MFSLTLTNGVPSKSHFSNRTHHFHRTHHFLHFPLIKNPSPIRCGIRELRERIETVKNTQKITEAMKLVAAARVRRAQEAVINGRPFSQTLVEVLQDINQRLRIEDIDVPLTNVRPVKKVALVVITGDRGLCGGFNNAVAKKAETRIRELKSVGLDCVVISVGKKGNSFFKSRNFVHVDRFIEGGSFPTTKEAQAIADDVFALFVSEDVDKVELVYMKFVSLVKFDPVIHTLLPLSTKGEVRDVNGNCVDAMEDEFFRLTTKEGKLALERDVVDRKRGECLPLMQFEQDPVQILDAMMPLYLNSQILRGLQESLASELAARMNAMSNATENAIELKKNLSMAYNRQRQARITGELLEIVAGAEALTPID 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0796 368 Hamap ATP synthase gamma chain [atpG]. 42 364 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lal5g0796 368 TIGRFAM ATPsyn_F1gamma: ATP synthase F1, gamma subunit 45 364 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lal5g0796 368 Coils Coil 45 65 - -
Lal5g0796 368 Gene3D - 113 236 - -
Lal5g0796 368 PANTHER ATP SYNTHASE GAMMA CHAIN 1, CHLOROPLASTIC 38 364 - -
Lal5g0796 368 PANTHER ATP SYNTHASE GAMMA CHAIN 38 364 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lal5g0796 368 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 44 364 IPR035968 GO:0015986|GO:0045261|GO:0046933
Lal5g0796 368 PRINTS ATP synthase gamma subunit signature 116 135 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lal5g0796 368 PRINTS ATP synthase gamma subunit signature 209 226 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lal5g0796 368 PRINTS ATP synthase gamma subunit signature 311 330 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lal5g0796 368 PRINTS ATP synthase gamma subunit signature 342 363 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lal5g0796 368 Pfam ATP synthase 45 364 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lal5g0796 368 ProSitePatterns ATP synthase gamma subunit signature. 350 363 IPR023632 -
Lal5g0796 368 CDD F1-ATPase_gamma 45 361 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lal5g0796 368 Gene3D ATP synthase, gamma subunit, helix hairpin domain 43 112 - -
Lal5g0796 368 Gene3D ATP synthase, gamma subunit, helix hairpin domain 268 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0796 Lal-Chr5 7365615 7386104 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0796 36 364 Primary Pumps ATPases AT1G15700 76.276 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0796 K02115 - qsu:112000322 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0796 5 7365615 7386104 Lal5g0796 5 7365615 7386104 ECH