Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0793 ATGAATATTACAACCATTAACGATGCATCAAATGATGAAAATGGGTTAGTGTCAATGATTAGTGTCAGCGGTGGTGGTGGTCATGGTGGGGTGGAAGAGGTGGCTCTTAAGAAGGGTCCTTGGACAATGGCAGAGGATGCTATTCTCATAGACTATGTGACAAATAATGGTGAAGGAAATTGGAATGCAGTGCAAAGGAATACATGGTTGGCTCGATGTGGCAAGAGTTGTAGGCTCAGATGGGCTAACCATTTGAGACCAAATTTGAAGAAGGGTTCTTTCTCTCATGATGAAGAGAAACTCATTGTTTTGTTCCATTCACAGTTTGGTAACAAATGGGCTCGAATGGCTGCTTTGTTACCTGGGAGAACAGACAATGAAATTAAGAACTACTGGAATACAAGGGTGAAGCGATTTCAGAGACAAGGACTTCCACTATATTTAGATGAGCATGATCAACCTACAAGACCAACCATCCCTTCTCCATGTGTCACCCCAACAAGATCAAACACCAATACATTTATAGATTCTAATTTTCTCCATCAAAACCACCACGGCTACGGCCACAACCACAACCACGTATTTAAATCCTCTCTGGAACTGGACTCTCTAGTACTCGAATCTAAAAGTCCAATCTCTCCAACAGCACAACAATCCCATCATTCTCCTCTTTCTTCACCACTCAACCATAGACAACCACCTTCCTCTTCCCCTCACCATTTCATGGACCCTACACCTTCCAATTCCAATCCACAACTTTCGTCTCTGTCCTTTACCTTCCAAAAACCAACTTCAGTTCTTGATAGCGCTCTTCGATTCAAACGCTATCGCTCCTATCCAAACTTCAGCCTCTACCATCTCCCTTCCATCACCCCTTACTCCACCTCTGCACCCTCTGATCAGATAGATCTTGATGCATTCAGGTTCCCACAACAGCACAGCTCCAGTTTTTCTCCTCAGTATTTTCAGACCCCATTGTTAGATTACGAACGAATCGTTTCACCCTCAACTTTTGTTTTCTCATCCAAATTGGAGCAGCATTCAAACCAATTTTCACAACCACAACTACAACCAGAGATTATGCATCATGATATAGAGTTCAATGATCCAACTTTTCAGACCAGTAGTGGGTTGCTAGGGGATTTTCAATTCGATGCTCAAGCACTAGCTTCTGGCCATAACTCAAAGAAACGAAGCTATTTTAGCTTAAATGAAGGAAATGATGTATTTGATGGATACCAAAACTTTGAGGATACTTACTGGTTTTCTACTTCAGGAGTTAATCCAAAGGAAGAAGCATCAGAGCTTAGCAAATCGATGAATGAGGACATAGCAAAATTCCTTAAAGTAATGCCTTCCACAATGCAGGGTACAGAAGGGAACAATAATAGTGAGGCAGAAGTCTCCAATGTCCAATCTTCCAGTGTCACAATAGATGACAATTTTGGACTTGATATGAAGCCCATAGCTTCCTTGTTTCCTCTCACCAATGCAACAAACCATAATAAAAGCCAAGGCTATTACTACTATTGGGACAATTTACCTGGTCTCTGCTGA 1557 0.4181 MNITTINDASNDENGLVSMISVSGGGGHGGVEEVALKKGPWTMAEDAILIDYVTNNGEGNWNAVQRNTWLARCGKSCRLRWANHLRPNLKKGSFSHDEEKLIVLFHSQFGNKWARMAALLPGRTDNEIKNYWNTRVKRFQRQGLPLYLDEHDQPTRPTIPSPCVTPTRSNTNTFIDSNFLHQNHHGYGHNHNHVFKSSLELDSLVLESKSPISPTAQQSHHSPLSSPLNHRQPPSSSPHHFMDPTPSNSNPQLSSLSFTFQKPTSVLDSALRFKRYRSYPNFSLYHLPSITPYSTSAPSDQIDLDAFRFPQQHSSSFSPQYFQTPLLDYERIVSPSTFVFSSKLEQHSNQFSQPQLQPEIMHHDIEFNDPTFQTSSGLLGDFQFDAQALASGHNSKKRSYFSLNEGNDVFDGYQNFEDTYWFSTSGVNPKEEASELSKSMNEDIAKFLKVMPSTMQGTEGNNNSEAEVSNVQSSSVTIDDNFGLDMKPIASLFPLTNATNHNKSQGYYYYWDNLPGLC 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0793 518 Pfam Myb-like DNA-binding domain 38 85 IPR001005 -
Lal5g0793 518 Pfam Myb-like DNA-binding domain 91 134 IPR001005 -
Lal5g0793 518 CDD SANT 40 85 IPR001005 -
Lal5g0793 518 Gene3D - 37 90 - -
Lal5g0793 518 SUPERFAMILY Homeodomain-like 36 132 IPR009057 -
Lal5g0793 518 MobiDBLite consensus disorder prediction 211 255 - -
Lal5g0793 518 CDD SANT 93 134 IPR001005 -
Lal5g0793 518 Gene3D - 93 138 - -
Lal5g0793 518 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 15 483 - -
Lal5g0793 518 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 140 IPR017930 -
Lal5g0793 518 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 85 IPR017930 -
Lal5g0793 518 ProSiteProfiles Myb-like domain profile. 86 136 IPR001005 -
Lal5g0793 518 SMART sant 90 138 IPR001005 -
Lal5g0793 518 SMART sant 37 87 IPR001005 -
Lal5g0793 518 ProSiteProfiles Myb-like domain profile. 33 85 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0793 Lal-Chr5 7341883 7343988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0793 279 518 MYB Transcription Factor Family AT4G26930 26.950 7.18e-06 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal5g0793 Myb_DNA-binding 2.7e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0793 - - lang:109329119 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0793 5 7341883 7343988 Lal5g0793 5 7341883 7343988 ECH