Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0753 ATGGGTAACTGTTGCTCCAGCAACCCCACCGATGCACCGGTAGCGGCGGCGAATAACACTGCCACCACCGACCACAAGGGAGATGCTAACCAACAAAGCAACAAACATAGAGACACCAATGAGCCATCCACAAACCCACCATCAACTTCAAAGCCACCATCTTCAGCCTCACATCCTCCATCAAGTCAGTCAAGGACAACAACCATAGGTCCTGTCCTTGGTCGACCAATGGAGGATGTGAGAGCCACATATAGCTTGGGGAAGGAGTTAGGGAGAGGACAATTTGGTATAACCCATTTGTGTACAAACAAGGTAACGGGTCAGAAATTTGCATGCAAAACAATAGCAAAGAGGAAACTAGTGCACAAGGAGGACATAGAGGACGTGAGGAGAGAGGTGCAAATCATGCATCATCTAACGGGTCAACCTAACATTGTTGAGCTTAAAGGTGCCTATGAGGACAAGCAATCGGTTCATTTGGTGATGGAGTTATGTGCTGGTGGTGAACTCTTTGATCGTATTATTGCTAAGGGACATTACACAGAACGTGCTGCAGCTTCGTTATTGAGAACCATAGTTCAGATTCTTCACACTTTTCATTCAATGGGTATCATTCATAGAGATCTTAAGCCTGAGAATTTCTTATTGTTGAGCAAGGACGAGACTGCACCCCTCAAGGCCACAGATTTTGGTCTCTCTGTTTTCTACAAGCAAGGAGAGATGTTCAAGGACATAGTTGGTAGCGCATATTACATTGCACCTGAGGTCTTGAAGAGGAGATATGGACCAGAAGTTGATATATGGAGTGTTGGTGTCATGTTATATATTCTTCTATGTGGTGTTCCTCCATTTTGGGCAGATTCGGAACATGGTATATTTAATGCGATCCTTAGAGGGCACATTGACTTTACAAGCGATCCATGGCCTTCAATTTCAGAACCTGCAAGAGATCTTGTAAGTAAAATGTTGAATTCAGATCCCAAACAAAGACTTACAGCGTACCAAGTTCTCAATCATCCTTGGATCAAGGAGGATGGAGAAGCTCCAGATAAACCTCTTGACAATGCTGTGCTGAATAGGCTCAAACAGTTCAGAGCAATGAACCAATTTAAGAAAGTTGCTCTCAGGGTCATTGCTGGATGTCTATCAGAAGAAGAAATCATGGGGTTGAAAGAAATGTTCAAGGGGATGGACACTGACAACAGTGGAACCATTACAATTGAAGAGCTCAAGCAAGGGCTAGCGAAACAAGGGACAAAGTTGTCAGAACAAGAACTTAAGCAATTAATGGAAGCTGCTGATGCTGATGGTAATGGAACCATAGATTATGACGAATTCATCACAGCAACAATGCACATGAACCGAATGAACAGAGAAGAACATCTTTACACTGCATTCCAATACTTTGATAAGGATAACAGCGGGTTCATTACAACAGAAGAACTAGAGCAAGCTCTACATGACTATAACATGCATGACGGCAGGGACATCAAAGAAATCCTTCAAGAAGTTGATGATGATAATGATGGGCGTATCAACTATGATGAGTTTGTGGCAATGATGGGAAAAGGAAATCCGGAGGCACATACTAAGAAGAGGCGTGATTCATTTGCTTTGCAATAG 1623 0.4313 MGNCCSSNPTDAPVAAANNTATTDHKGDANQQSNKHRDTNEPSTNPPSTSKPPSSASHPPSSQSRTTTIGPVLGRPMEDVRATYSLGKELGRGQFGITHLCTNKVTGQKFACKTIAKRKLVHKEDIEDVRREVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQILHTFHSMGIIHRDLKPENFLLLSKDETAPLKATDFGLSVFYKQGEMFKDIVGSAYYIAPEVLKRRYGPEVDIWSVGVMLYILLCGVPPFWADSEHGIFNAILRGHIDFTSDPWPSISEPARDLVSKMLNSDPKQRLTAYQVLNHPWIKEDGEAPDKPLDNAVLNRLKQFRAMNQFKKVALRVIAGCLSEEEIMGLKEMFKGMDTDNSGTITIEELKQGLAKQGTKLSEQELKQLMEAADADGNGTIDYDEFITATMHMNRMNREEHLYTAFQYFDKDNSGFITTEELEQALHDYNMHDGRDIKEILQEVDDDNDGRINYDEFVAMMGKGNPEAHTKKRRDSFALQ 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0753 540 ProSiteProfiles EF-hand calcium-binding domain profile. 457 492 IPR002048 GO:0005509
Lal5g0753 540 SUPERFAMILY EF-hand 382 521 IPR011992 -
Lal5g0753 540 SUPERFAMILY Protein kinase-like (PK-like) 64 370 IPR011009 -
Lal5g0753 540 Pfam Protein kinase domain 84 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g0753 540 ProSitePatterns EF-hand calcium-binding domain. 398 410 IPR018247 -
Lal5g0753 540 CDD STKc_CAMK 84 341 - -
Lal5g0753 540 ProSiteProfiles EF-hand calcium-binding domain profile. 496 527 IPR002048 GO:0005509
Lal5g0753 540 ProSitePatterns Protein kinases ATP-binding region signature. 90 117 IPR017441 GO:0005524
Lal5g0753 540 ProSiteProfiles EF-hand calcium-binding domain profile. 421 456 IPR002048 GO:0005509
Lal5g0753 540 Gene3D Phosphorylase Kinase; domain 1 86 169 - -
Lal5g0753 540 PANTHER SERINE/THREONINE-PROTEIN KINASE 29 530 - -
Lal5g0753 540 ProSitePatterns EF-hand calcium-binding domain. 505 517 IPR018247 -
Lal5g0753 540 SMART efh_1 461 489 IPR002048 GO:0005509
Lal5g0753 540 SMART efh_1 496 524 IPR002048 GO:0005509
Lal5g0753 540 SMART efh_1 389 417 IPR002048 GO:0005509
Lal5g0753 540 SMART efh_1 425 453 IPR002048 GO:0005509
Lal5g0753 540 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 29 530 - -
Lal5g0753 540 MobiDBLite consensus disorder prediction 1 28 - -
Lal5g0753 540 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Lal5g0753 540 Gene3D Transferase(Phosphotransferase) domain 1 170 349 - -
Lal5g0753 540 Gene3D - 350 526 - -
Lal5g0753 540 MobiDBLite consensus disorder prediction 55 70 - -
Lal5g0753 540 MobiDBLite consensus disorder prediction 1 76 - -
Lal5g0753 540 ProSitePatterns EF-hand calcium-binding domain. 470 482 IPR018247 -
Lal5g0753 540 SMART serkin_6 84 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g0753 540 Pfam EF-hand domain pair 390 450 IPR002048 GO:0005509
Lal5g0753 540 Pfam EF-hand domain pair 459 521 IPR002048 GO:0005509
Lal5g0753 540 ProSitePatterns EF-hand calcium-binding domain. 434 446 IPR018247 -
Lal5g0753 540 ProSiteProfiles EF-hand calcium-binding domain profile. 385 420 IPR002048 GO:0005509
Lal5g0753 540 ProSiteProfiles Protein kinase domain profile. 84 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0753 Lal-Chr5 6727010 6731545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0753 1 535 EF-hand Containing Proteins AT5G12180 78.692 0.0 878
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lal5g0753 Pkinase 2.1e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0753 K13412 - gmx:100781355 908.672