Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0735 ATGGAGGCGAATCAATCTCTTCAAGAGAACTCGAAATCGTTCGATTTGAACACTGAAAAACAAGAAGAGGACACTATTATCCACAACGGTGAAGGTTCTGCTTCTGGAGCGTTGAAAATCAAAGAATATGATTTAAAGGCACAAGATTGTTCTGATCAAGTTGTGAAAAAGAAGCGTAGAAGAAAATCTAAAAGGGAAGCGGAGATCGAACCGTTGAGTTTGAAGAAAAAGGTAGATAATGATAAGGTAACTGCTTCTGTTATTGGTATAAGATTGAATCCTCTGAATGAAGCTGCACAAGAAGACAAGTCTGAAGAGGTAAATGGTGGCATTGTGAAGAAGAGACGGGGTAGAAAAAGAAAAACCCTAGACAAAGGTGAAGCTAGTGATGCAAAGGTAAAAGATCAAGCTAACGCTGAAGAGGAATTGAAGGATGACCATGAAGAACATAGTGGCTTTTCGAAGCAGAGTCGTCGTGGTAAAAAAAGAAAAACCTCCAACAAAGATGATGAAGCTAGTGATGCAAAGGCCGAAGACCAATCTAATGGTGAATCTGAAATGCCTTCAGAGAGTTCCATTCAGAGACGCAGCTTACGAAGTGCTCGAAGACACAGTAATACACAAGAGATACCAAAAGTCAAGAGAAATGTCAAATTTACTGAAGAGGAATGCTTAATGTGCCATCAATGTCAGAGAAATGATAAAGGCGAGGTTGTGAGGTATCCTGAATGGACAAATGATGTTGTTGCTGAGGCATGCCCTGTGTGCCGTGGTAATTGCAATTGCAAAGCATGTTTGCGGTCTGATGAACTTATTAAGAAAATGAAACAAGAGGTGAAAGAGAAGAGGTATCAAGGTAATGAAGTTGAGCTCTCCAAGTATTTGCTGATACGACTTCTTCCATTTGTAAGACAGTTGAATGAAGAACAAATGCTTGAGTTGGTTATAGAAGCTAAGAGACAAGGGCTCTCACTCTCAGAGCTAAATATTGAAAAGGCAAAGTACTCACTGAAGGAGCGTTTACACTCATATTATTTAGTTGTTGACTTAATGCTGTTTTGTAGCGACAACTGCAAAACATCAATATTCGATTACCACAGAAGCTGTAGAAAATGCTCTTTTGACCTATGTCTCACCTGTTGCCATGAGCTTCGTGATGGGCAGCTTCTAGGTGGTGCTGATCCAGTTGAGTTGGAATTTATCAAATGCAGTCTTGACTATCTGCATGGAGGAAAAGAAAAGAAAAAGATAAAGGAGCCCGAGATACATGAATTCCAACTCAAGTCTGAGCCTGACATTCGTGGATGGTCAAGATCTGGGTGGCATGCAGAAAGTGATGCTAGCATTCCCTGTCCAAAGGTCAATGATGGGTGCTGCCATGGTTTTCTTGAGTTGAAGAGCATTTTTGGCCAGATTTTTATTTCAGAGTTAGTATATAAAGCAGAAGAACTAGCAAAAGCATATAAGCTTCAAAATGCAATTGAAACCCCTGGCAACTCGTGTTCTTGTCCGAAGATCAGTAGAAACTCAGATGTTAGAAATAATACGAGGAAAGCAGCTTCTCGTGAAGATTCCAGTGACAACTGGTTATACTGTCCTAGGGCTGTTGATTTACGACCTGTGGATTTAAAGCATTTTCAATGGCATTGGGACAAGGGGGAGCCTGTCATTGTCAGCGATGTGCTTGAATGTACATCTGGTTTAAGTTGGGAACCACTAGTGATGTGGCGTGCTTTCCGTCAAATAACTAATACCAAGCATGGTCAACATTTGGATGTGAAGGTCTTGGATTGCTTAGATTGGTGTGAGGGAGAGATCAATATCCATCAATTCTTTACGGGGTATACAAATGGTCGGTATGATTGGGAAAATTGGCCTCAGATACTGAAACTGAAAGATTGGCCCCCTTCTAATTTATTCGAGGAACGTTTACCTCGTCATTGTGCTGAGTTCATATCTTCCTTGCCCTTTAAAGAATATACAGATCCTCTCAGAGGTGCACTTAACCTCGCTGTGAAGTTACCTAATAAATGTCTGAAGCCAGACATGGGACCAAAGACATATATTGCTTATGGAGTTGCTCAGGAGCTTGGACGTGGTGATTCTGTGACTAAGCTTCACTGTGACATGTCTGATGCAGTAAATGTGTTGACTCATATTGTTGACGTGAAATTGGAGCATAAAAGTATTGTTGCCATTGATACATTGAAGCTAAAGCACCTTGAACAAGATAAGAGGGAGCTCTTTCGAGATGATCAGGAGGGAGAAACTAATGTTGGGATGTCTACAAGTTCACCCTCTACAGTAGATGGTCTTTCAAATGGGTCAGAGTTGCAAGATGTTGAGAAAGTCAAAATGAAACATGAAAACATTATGTCAACTGGGGAGGATGCTTCAGATGGCGCTCTATGGGATATTTTTCGGAGGCAGGACGTACCTAAGTTGCAGGAATATCTGAAGAAGCATTTTAGAGAGTTTAGGCACGTCCACTGCCGTCCTTTAAATCAGGTTATGCACCCCATTCATGACCAAACCATGTATCTGACGGAGGAGCATAAGAGGAAGCTAAAGGAGGAGTATGGGATTGAGCCTTGGACTTTTATTCAGAAGCTAGGAGATGCTGTTTTTATTCCCACTGGCTGTCCTCACCAAGTTAGAAATCTGAAGTCATGCATTAAAGTTGCACTTGATTTTGTCTCTCCTGAAAATGTTGGTGAGTGTTTCCGCTTGACAGAGGAATTCCGCACACTTCCAATAAATCACAAATCTTCTGAGGACAAATTGGAGGTCTGGGGAAACCTAGGTTCCCAACAGATTGAAGCTGATTTGAAGTGTATGTTTTTTGAGCCATTATTGACCTGGATTAATCGAACTTCAATTGCTGACCTGTTAGCAGGATCATGA 2904 0.4118 MEANQSLQENSKSFDLNTEKQEEDTIIHNGEGSASGALKIKEYDLKAQDCSDQVVKKKRRRKSKREAEIEPLSLKKKVDNDKVTASVIGIRLNPLNEAAQEDKSEEVNGGIVKKRRGRKRKTLDKGEASDAKVKDQANAEEELKDDHEEHSGFSKQSRRGKKRKTSNKDDEASDAKAEDQSNGESEMPSESSIQRRSLRSARRHSNTQEIPKVKRNVKFTEEECLMCHQCQRNDKGEVVRYPEWTNDVVAEACPVCRGNCNCKACLRSDELIKKMKQEVKEKRYQGNEVELSKYLLIRLLPFVRQLNEEQMLELVIEAKRQGLSLSELNIEKAKYSLKERLHSYYLVVDLMLFCSDNCKTSIFDYHRSCRKCSFDLCLTCCHELRDGQLLGGADPVELEFIKCSLDYLHGGKEKKKIKEPEIHEFQLKSEPDIRGWSRSGWHAESDASIPCPKVNDGCCHGFLELKSIFGQIFISELVYKAEELAKAYKLQNAIETPGNSCSCPKISRNSDVRNNTRKAASREDSSDNWLYCPRAVDLRPVDLKHFQWHWDKGEPVIVSDVLECTSGLSWEPLVMWRAFRQITNTKHGQHLDVKVLDCLDWCEGEINIHQFFTGYTNGRYDWENWPQILKLKDWPPSNLFEERLPRHCAEFISSLPFKEYTDPLRGALNLAVKLPNKCLKPDMGPKTYIAYGVAQELGRGDSVTKLHCDMSDAVNVLTHIVDVKLEHKSIVAIDTLKLKHLEQDKRELFRDDQEGETNVGMSTSSPSTVDGLSNGSELQDVEKVKMKHENIMSTGEDASDGALWDIFRRQDVPKLQEYLKKHFREFRHVHCRPLNQVMHPIHDQTMYLTEEHKRKLKEEYGIEPWTFIQKLGDAVFIPTGCPHQVRNLKSCIKVALDFVSPENVGECFRLTEEFRTLPINHKSSEDKLEVWGNLGSQQIEADLKCMFFEPLLTWINRTSIADLLAGS 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0735 967 MobiDBLite consensus disorder prediction 163 183 - -
Lal5g0735 967 SMART cupin_9 644 915 IPR003347 -
Lal5g0735 967 MobiDBLite consensus disorder prediction 94 213 - -
Lal5g0735 967 ProSiteProfiles JmjC domain profile. 663 915 IPR003347 -
Lal5g0735 967 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 42 930 IPR045109 GO:0032454|GO:0033169
Lal5g0735 967 SUPERFAMILY Clavaminate synthase-like 540 931 - -
Lal5g0735 967 MobiDBLite consensus disorder prediction 122 155 - -
Lal5g0735 967 MobiDBLite consensus disorder prediction 752 774 - -
Lal5g0735 967 Gene3D Cupin 533 924 - -
Lal5g0735 967 MobiDBLite consensus disorder prediction 756 774 - -
Lal5g0735 967 MobiDBLite consensus disorder prediction 1 32 - -
Lal5g0735 967 MobiDBLite consensus disorder prediction 98 112 - -
Lal5g0735 967 Pfam JmjC domain, hydroxylase 801 898 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0735 Lal-Chr5 6456681 6463694 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Lal5g0735 JmjC 2e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0735 K15601 - gmx:112997634 1060.83