Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0709 ATGGAGGCGAATCAATCTCTTCAAGAGAACTCGAAATCGTTCGATTTGAACACTGAAAAACAAGAAGAGGACACTATTATCCACAACGGTGAAGGTTCTGCTTCTGGAGCGTTGAAAATCAAAGAATATGATTTAAAGGCACGAGATTGTTCTGATCAAGTTGTGAAAAAGAAGCGTAGAAGAAAATCTAAAAGGGAAGCGGAGATCGAACCGTTGAGTTTGAAGAAAAAGGTAGATAATGATAAGGTAACTGCTTCTGTTATTGGTATAAGATTGAATCCTCTGAATGAAGCTGCACAAGAAGACAAGTCTGAAGAGGTAAATGGTGGCATTGTGAAGAAGAGACGGGGTAGAAAAAGAAAAACCCTAGACAAAGGTGAAGCTAGTGATGCAAAGGTAAAAGATCAAGCTAACGCTGAAGAGGAATTGAAGGATGACCATGAAGAACATAGTGGCTTTTCGAAGCAGAGTCGTCGTGGTAGAAAAAGAAAAACCTCCAACAAAGATGATGAAGCTAGTGATGCAAAGGACAAAGATCAATCTAATGGTGAAAAGGAATTTAAGGATGACCATGAAGAACATGGTGGCTTTTCGAAGCAGAGTCGTTTTCACAGAAAAAGAAAAACCTCCAACAAAGATGATGAAGCTAGTGATGCAAAGGCCGAAGACCAATCTAATGGTGAATCTGAAATGCCTTCAGAGAGTTCCATTCAGAGACGCAGCTTACGAAGTGCTCGAAGACACAGTAATACACAAGAGATACCAAAAGTCAAGAGAAATGTCAAATTTACTGAAGAGGAATGCTTAATGTGCCATCAATGTCAGAGAAATGATAAAGGCGAGGTTGTGAGGTATCCTGAATGGACAAATGATGTTGTTGCTGAGGCATGCCCTGTGTGCCGTGGTAATTGCAATTGCAAAGCATGTTTGCGGTCTGATGAACTTATTAAGAAAATGAAACAAGAGGTGAAAGAGAAGAGGTATCAAGGTAATGAAGTTGAGCTCTCCAAGTATTTGCTGATACGACTTCTTCCATTTGTAAGACAGTTGAATGAAGAACAAATGCTTGAGTTGGTTATAGAAGCTAAGAGACAAGGGCTCTCACTCTCAGAGCTAAATATTGAAAAGGCAAAGTACTCACTGAAGGAGCGTTTACACTCATATTATTTAGTTGTTGACTTAATGCTGTTTTGTAGCGACAACTGCAAAACATCAATATTCGATTACCACAGAAGCTGTAGAAAATGCTCTTTTGACCTATGTCTCACCTGTTGCCATGAGCTTCGTGATGGGCAGCTTCTAGGTGGTGCTGATCCAGTTGAGTTGGAATTTATCAAATGCAGTCTTGACTATCTGCATGGAGGAAAAGAAAAGGAAAAGATAAAGGAGCCCGAGATACATGAATTCCAACTCAAGTCTGAGCCTGACATTCGTGGATGGTCAAGATCTGGGTGGCATGCAGAAAGTGATGCTAGCATTCCCTGTCCAAAGGTCAATGATGGGTGCTGCCATGGTTTTCTTGAGTTGAAGAGCATTTTTGGCCAGACTTTTATTTCAGAGTTAGTATATAAAGCAGAAGAACTAGCAAAAGCATATAAGCTTCAAAATGCAATTGAAACCCCTGGCAACTCGTGTTCTTGTCCGAAGATCAGTAGAAACTCAGATGTTAGAAATAATACGAGGAAAGCAGCTTCTCGTGAAGATTCCAGTGACAACTGGTTATACTGTCCTAGGGCTGTTGATTTACGACCTGTGGATTTAAAGCATTTTCAATGGCATTGGGACAAGGGGGAGCCTGTCATTGTCAGCGATGTGCTTGAATGTACATCTGGTTTAAGTTGGGAACCACTAGTGATGTGGCGTGCTTTCCGTCAAATAACTAATACCAAGCATGGTCAACATTTGGATGTGAAGGTCTTGGATTGCTTAGATTGGTGTGAGGGAGAGATCAATATCCATCAATTCTTTACGGGGTATACAAATGGTCGGTATGATTGGGAAAATTGGCCTCAGATACTGAAACTGAAAGATTGGCCCCCTTCTAATTTATTCGAGGAACGTCTACCTCGTCATTGTGCTGAGTTCATATCTTCCTTGCCCTTTAAAGAATATACAGATCCTCTCAGAGGTGCACTTAACCTCGCTGTGAAGTTACCTAATAAATGTCTGAAGCCAGACATGGGACCAAAGACATATATTGCTTATGGAGTTGCTCAGGAGCTTGGACGTGGTGATTCTGTGACTAAGCTTCACTGTGACATGTCTGATGCAGTAAATGTGTTGACTCATATTGTTGACGTGAAATTGGAGCATAAAAGTATTGTTGCCATTGATACATTGAAGCTAAAGCACCTTGAACAAGATAAGAGGGAGCTCTTTCGAGATGATCAGGAGGGAGAAACTAATGTTGGGATGTCTACAAGTTCACCCTCTACAGTAGATGGTCTTTCAAATGGGTCAGAGTTGCAAGATGTTGAGAAAGTCAAAATGAAACATGAAAACATTATGTCAACTGGGGAGGATGCTTCAGATGGCGCTCTATGGGATATTTTTCGGAGGCAGGACGTACCTAAGTTGCAGGAATATCTGAAGAAGCATTTTAGAGAGTTTAGGCACGTCCACTGCCGTCCTTTAAATCAGGTTATGCACCCCATTCATGACCAAACCATGTATCTGACGGAGGAGCATAAGAGGAAGCTAAAGGAGGAGTATGGGATTGAGCCTTGGACTTTTATTCAGAAGCTAGGAGATGCTGTTTTTATTCCCACTGGCTGTCCTCACCAAGTTAGAAATCTGAAGTCATGCATTAAAGTTGCACTTGATTTTGTCTCTCCTGAAAATGTTGGTGAGTGTTTCCGCTTGACAGAGGAATTCCGCACACTTCCAATAAATCACAAATCTTCCGAGGACAAATTGGAGGTGAAGAAAATGACAGTCTATGCTATGGATAATGTGGTTAAAAATTTGGAGAAAACAAGGTCTGGGGAAACCTAG 2994 0.4115 MEANQSLQENSKSFDLNTEKQEEDTIIHNGEGSASGALKIKEYDLKARDCSDQVVKKKRRRKSKREAEIEPLSLKKKVDNDKVTASVIGIRLNPLNEAAQEDKSEEVNGGIVKKRRGRKRKTLDKGEASDAKVKDQANAEEELKDDHEEHSGFSKQSRRGRKRKTSNKDDEASDAKDKDQSNGEKEFKDDHEEHGGFSKQSRFHRKRKTSNKDDEASDAKAEDQSNGESEMPSESSIQRRSLRSARRHSNTQEIPKVKRNVKFTEEECLMCHQCQRNDKGEVVRYPEWTNDVVAEACPVCRGNCNCKACLRSDELIKKMKQEVKEKRYQGNEVELSKYLLIRLLPFVRQLNEEQMLELVIEAKRQGLSLSELNIEKAKYSLKERLHSYYLVVDLMLFCSDNCKTSIFDYHRSCRKCSFDLCLTCCHELRDGQLLGGADPVELEFIKCSLDYLHGGKEKEKIKEPEIHEFQLKSEPDIRGWSRSGWHAESDASIPCPKVNDGCCHGFLELKSIFGQTFISELVYKAEELAKAYKLQNAIETPGNSCSCPKISRNSDVRNNTRKAASREDSSDNWLYCPRAVDLRPVDLKHFQWHWDKGEPVIVSDVLECTSGLSWEPLVMWRAFRQITNTKHGQHLDVKVLDCLDWCEGEINIHQFFTGYTNGRYDWENWPQILKLKDWPPSNLFEERLPRHCAEFISSLPFKEYTDPLRGALNLAVKLPNKCLKPDMGPKTYIAYGVAQELGRGDSVTKLHCDMSDAVNVLTHIVDVKLEHKSIVAIDTLKLKHLEQDKRELFRDDQEGETNVGMSTSSPSTVDGLSNGSELQDVEKVKMKHENIMSTGEDASDGALWDIFRRQDVPKLQEYLKKHFREFRHVHCRPLNQVMHPIHDQTMYLTEEHKRKLKEEYGIEPWTFIQKLGDAVFIPTGCPHQVRNLKSCIKVALDFVSPENVGECFRLTEEFRTLPINHKSSEDKLEVKKMTVYAMDNVVKNLEKTRSGET 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0709 997 MobiDBLite consensus disorder prediction 96 257 - -
Lal5g0709 997 Pfam JmjC domain, hydroxylase 845 942 IPR003347 -
Lal5g0709 997 Gene3D Cupin 577 968 - -
Lal5g0709 997 ProSiteProfiles JmjC domain profile. 707 959 IPR003347 -
Lal5g0709 997 SMART cupin_9 688 959 IPR003347 -
Lal5g0709 997 MobiDBLite consensus disorder prediction 163 199 - -
Lal5g0709 997 MobiDBLite consensus disorder prediction 122 155 - -
Lal5g0709 997 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 56 991 IPR045109 GO:0032454|GO:0033169
Lal5g0709 997 MobiDBLite consensus disorder prediction 796 818 - -
Lal5g0709 997 MobiDBLite consensus disorder prediction 1 32 - -
Lal5g0709 997 MobiDBLite consensus disorder prediction 98 112 - -
Lal5g0709 997 MobiDBLite consensus disorder prediction 800 818 - -
Lal5g0709 997 SUPERFAMILY Clavaminate synthase-like 584 978 - -
Lal5g0709 997 MobiDBLite consensus disorder prediction 207 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0709 Lal-Chr5 6178035 6186351 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Lal5g0709 JmjC 2.1e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0709 K15601 - gmx:100805723 1084.32