Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0450 ATGAAGCTTTGCAACACATCTCTTTCCCTTGCCTTAAAGGCGGCGAAAAGAGCATCTTCTATCGTATCAAAGATTCTGAAAATGACTAATTTGACCGACAATGCCAAAGTTGTCGTAAAAGATTGTCTCGACAATGTACAATCATCAATGGGACAACTTCAAGATTCTCTAGCTGCAATGGGACAATTGGATGGCATTGATAAACAATTTCAGATAAGTAACATGCAAACTTGGATGAGTTCTTCAATCACTAATGATCAAACATGTTCAGATGAATTGGATGAAATGAACTTGGATGCTACTATAAGGGATGAGATTAGAAAGGTTGTTTTGAATGCTGCAATGGTGAATAGCAATGCTTTGTATTTTGTCAACAATCTCATATACTAA 390 0.3615 MKLCNTSLSLALKAAKRASSIVSKILKMTNLTDNAKVVVKDCLDNVQSSMGQLQDSLAAMGQLDGIDKQFQISNMQTWMSSSITNDQTCSDELDEMNLDATIRDEIRKVVLNAAMVNSNALYFVNNLIY 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0450 129 PANTHER PECTINESTERASE INHIBITOR-LIKE 1 127 - -
Lal5g0450 129 SMART PMEI_2 1 123 IPR006501 GO:0004857
Lal5g0450 129 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 127 IPR035513 -
Lal5g0450 129 Pfam Plant invertase/pectin methylesterase inhibitor 3 121 IPR006501 GO:0004857
Lal5g0450 129 CDD PMEI-like_3 1 127 - -
Lal5g0450 129 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 2 127 IPR035513 -
Lal5g0450 129 PANTHER PECTINESTERASE INHIBITOR 4 1 127 - -
Lal5g0450 129 TIGRFAM PME_inhib: pectinesterase inhibitor domain 2 127 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0450 Lal-Chr5 4574389 4574778 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0450 7 127 Carbohydrate Esterase AT3G14310 25.806 1.23e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0450 - - gmx:100527443 169.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0450 5 4574389 4574778 Lal3g1238 3 17947718 17948299 LSH