Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0443 ATGGCAATGCGTGACCTTGTTTCTGGTTCTACATCTTGTCCTGATCCTTCTTCTTCTTCTTCTTCAAATAATCCTCTTGCTTCTCTCGCTAACTCTCTTATTGCCTCTTCCTCTAAAACTCAGGAGAGACTTAAGGAGATTCCTACATCCACTCCAACTGCTAATGGCTTCCAAATTTACTCTCAGCGTTCCAATGAGCTTCCTGGATCTGAATTAGATAAGCCTTTTTTTGATGCTAACTCTCAGGGGTCGGAGTTTCTTAATAGGTTTCGGTCGGCCGGTGGGGTTGGTGGTGGGCTTGAGGATACTTGGGATGAGATACAGCGCGAGGGTAGAGTTAGCCAACTTCCAACTTCTCAATTCGAGCGTGTCTATGATCAGGGACCTGGTCCACAGCTTCATCAACCACCATTGGATGGGACACCTCAAAGAGTTCTATCAAGCTTTTTGCACTCATTTCTTGATAGTGGCCGTGGTGGAATCCCATTTCATCCTGCTCCTCTTCCATTATTGGGTTTATCTGAAGGTGATAAACAATGTATACGTGACCGTAGTAGCATAATGGCTAGGCATCTATTTGCAGATAAAAGTGAAGAGTTTATTGATGCACAAGTAAATGCACTTCTGTGCTCTCTAGATATCGACAGCAGTGTACGTGATAAGGGACCTATGCCTGAAAGGTTCCGGGAGTTTGATGATTACTGGAATGAATCTCAAGGCAACCTGAGACTTGGTGCTCCTGCTGCAGATGGATGGATTACTGAATATAGTCAACATAGGCAACAATACGATAATCCCGATTCTTGGGCTAGCACATTCGAGCAGCAACATGGTGCCAATGGTTGGGCATCTGAATTTCAACATTCTCAATTGTCATCAGTTGATCAAATGCGAGGTATGAACATGTCAAACTTAGCTGCAATGGAGCAGACTCGTATGCTTGCAAATACATTGTCCCAAAATGGTGATCCTAAATTTCAGAACTCGAATTTTTTTCAATTTGTATCAAAGATGAGCCGTGGTGAGTTGATTATTGATGACAATCAAGTTAAAGAGACTGCATTACCTGCATCTGGAGATTGGGCAGCAGAATACCAGCAGCAATACAATCACGGTCATGCACAGGTTTCTCGTGGACCTGATCAGTGGGCGAATGAGTTTACAACTGAAGGACAACAGCATGGAGCAGTTGGTGACCAGTGGGTTAATGAATTCTCAAAGTTGCATGTTGATGACTGGGCAGATGAATTTGATCAGCAGGTTGGGGAAGGAGTTTTTGGAGAAAGCTCCTCTGAACATTGGGCACATGCCTATGATGAGTACCTACATGAGCAAGTTGCTGCCAAGAAGCTGTCAGATAGTTCAAGGGGCGTGTATGTCTTTTCAGATTTAAATCCTTATGTTGGCCATCCAAACCCATTAAAAGAAGGCCAAGATCTGTTCAGGAAAGGACTTTTAAGTGAAGCTGTTCTTGCATTGGAAGCTGAAGTCATGAAAAACCCTGAAAACACTGAAGGGTGGAGACTACTTGGAATAGCGCATGCAGAGAACGATGATGATCAACAGGCCATTGCAGCAATGATGCGTGCACAGGAGGCTGATCCAACAAACCTTGAAGTGCTTCTTTCTCTTGGCGTCAGTCATACAAATGAACTGGAGCAAACTTCTGCTCTGAAGTATCTATATGGATGGCTACACCATCAGCCGAAGTATGGGACACTTACCCCTCATGAGATGCCAAATTCTTTGTACCATGCTGATGTTGTTAGAGTATTCAATGAAGCTGCTCAAGCCTACCCTGATGATGCAGATGTCCACATAGTTCTTGGGGTCCTATACAACTTATCCAGAGAATATGACAAAGCCATTGCATCTTTCGAACAAGCATTGAAACTTAAGCCGCGGGATTACTCTCTCTGGAACAAGCTTGGCGCAACACAAGCAAACAGTGTTCAAAGTGCAGATGCAATAATGGCTTATCGGCAGGCATTAGATTTAAAGCCTAATTATGTTCGTGCTTGGGCAAATATGGGTATTAGTTATGCAAACCAGGGTATGTATGATGAATCTATTCGATATTATGTCCGGGCACTTGCCATGAACCCAAAAGCAGAGAATGCATGGCAATATCTGAGAATCTCATTGAGTTGTGCTTCAAGGAATGATTTGTTGGATGCTTGCGATAATCGTAATCTGGACCTTCTCCAGAAGGAGTTTTCACTACAATAA 2229 0.4347 MAMRDLVSGSTSCPDPSSSSSSNNPLASLANSLIASSSKTQERLKEIPTSTPTANGFQIYSQRSNELPGSELDKPFFDANSQGSEFLNRFRSAGGVGGGLEDTWDEIQREGRVSQLPTSQFERVYDQGPGPQLHQPPLDGTPQRVLSSFLHSFLDSGRGGIPFHPAPLPLLGLSEGDKQCIRDRSSIMARHLFADKSEEFIDAQVNALLCSLDIDSSVRDKGPMPERFREFDDYWNESQGNLRLGAPAADGWITEYSQHRQQYDNPDSWASTFEQQHGANGWASEFQHSQLSSVDQMRGMNMSNLAAMEQTRMLANTLSQNGDPKFQNSNFFQFVSKMSRGELIIDDNQVKETALPASGDWAAEYQQQYNHGHAQVSRGPDQWANEFTTEGQQHGAVGDQWVNEFSKLHVDDWADEFDQQVGEGVFGESSSEHWAHAYDEYLHEQVAAKKLSDSSRGVYVFSDLNPYVGHPNPLKEGQDLFRKGLLSEAVLALEAEVMKNPENTEGWRLLGIAHAENDDDQQAIAAMMRAQEADPTNLEVLLSLGVSHTNELEQTSALKYLYGWLHHQPKYGTLTPHEMPNSLYHADVVRVFNEAAQAYPDDADVHIVLGVLYNLSREYDKAIASFEQALKLKPRDYSLWNKLGATQANSVQSADAIMAYRQALDLKPNYVRAWANMGISYANQGMYDESIRYYVRALAMNPKAENAWQYLRISLSCASRNDLLDACDNRNLDLLQKEFSLQ 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0443 742 ProSiteProfiles TPR repeat region circular profile. 671 703 - -
Lal5g0443 742 Pfam Tetratricopeptide repeat 672 703 IPR001440 GO:0005515
Lal5g0443 742 Pfam Tetratricopeptide repeat 603 635 IPR019734 GO:0005515
Lal5g0443 742 ProSiteProfiles TPR repeat region circular profile. 603 636 - -
Lal5g0443 742 ProSiteProfiles TPR repeat profile. 504 537 IPR019734 GO:0005515
Lal5g0443 742 PANTHER PEROXISOMAL TARGETING SIGNAL 1 RECEPTOR PEX5 1 741 IPR024111 -
Lal5g0443 742 Pfam Tetratricopeptide repeat 474 536 - -
Lal5g0443 742 ProSiteProfiles TPR repeat profile. 671 704 IPR019734 GO:0005515
Lal5g0443 742 MobiDBLite consensus disorder prediction 10 58 - -
Lal5g0443 742 ProSiteProfiles TPR repeat profile. 603 636 IPR019734 GO:0005515
Lal5g0443 742 ProSiteProfiles TPR repeat profile. 637 670 IPR019734 GO:0005515
Lal5g0443 742 MobiDBLite consensus disorder prediction 1 58 - -
Lal5g0443 742 PANTHER BNAC09G53570D PROTEIN 1 741 - -
Lal5g0443 742 SMART tpr_5 504 537 IPR019734 GO:0005515
Lal5g0443 742 SMART tpr_5 603 636 IPR019734 GO:0005515
Lal5g0443 742 SMART tpr_5 637 670 IPR019734 GO:0005515
Lal5g0443 742 SMART tpr_5 671 704 IPR019734 GO:0005515
Lal5g0443 742 Gene3D Tetratricopeptide repeat domain 453 742 IPR011990 GO:0005515
Lal5g0443 742 SUPERFAMILY TPR-like 455 741 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0443 616 734 Glycosyltransferase AT3G04240 31.933 3.96e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0443 K13342 - gmx:100527272 1191.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0443 5 4447518 4462672 Lal5g0443 5 4447518 4462672 ECH