Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal5g0439 | ATGGCTGGGATTGATGATAATGTCACGCTAGTTGGCGATTGGGGTCCTCCGAGTCCGAGCCCGAGAACCCTTTTTTCTAGAATGCTAGGTGAAGAGAATGTAACGAAATCAATCTCAGACCCTCTAGGAAGTGGTAGAACAGGGTTTATGTTTCCGGGGAATCATGAACAGTCTGAGGCAGGGAAAGGAGACATAAAAGATAGCTCACAAGATGGTGATTCTGGTGACCAATTGACCTACTCGACGTTTCTGTCCGACCAGAAATCAAATTCGAGAGGAGGTCTTGTTGAAAGGATGGCTGCTAGAGCTGGGTTTAATGCTCCGAGGTTGAATACAGAAAGCATTAGATCTACTGATCTTACACTTAATTCTGATATTCAGTCTCCTTACTTGACCATACCACCAGGTCTCAGTCCCACTACACTTTTGGAATCTCCGGTGTTCCTTGCAAACACGTTGGCAGAGCCATCTCCAACAACTGGAAAGTTTCCGTTCATCTCAAATGGCAATATCCGGTACTCGGAATTATCATCCGATGCCCCTGAAAAATCTAAAGAAAACCTTGATGATTTCTATGCATCATCCTTTGCTTTCAAGCCTGCTACAGATTCGGACTCGTCATTTTATTATGGTGCTGCAAGGAAAGTAAGTCCAACTACAGTTCCTCAACAATCTGTTCCTGGTATTGAGGCCTCAGTTCAGTCAGAAAATTCTTTCCAATCTCAAAGTGTTGATGCACCCAAGGTTCAAACTGAGAACGAAAGCAGCCTCCATCATCAGCCAGACTTTATCGAGTCGCCACCTCAAAACGATAATGGAGTTAAATCTTTCTCAGGTGATCAAAGGGCATTTAATACTGTTGGTGGTAGCATTGAGCATTCCGCACCACCTGAAGAGCAAGCAGATGAAGTGGGAGATCAAAGAGGGAATGGAGACTCAACGGTTGCTGGTGGTACACCAGCTGAAGATGGATATAACTGGAGAAAATATGGTCAAAAGCAAGTTAAGGGCAGCGAATATCCGCGAAGTTACTATAAGTGTACACATCCAAATTGTCTGGTTAGGAAGAAAGTGGAACGGTCTCACGAGGGCCACATGACAGAGATTATCTATAAGGGAGCACACAACCATCCCAAACCAACTCTAAATCGTCGGTCCACCATGGGGTCAGCCAACCCTAATACGGACATGCAATTAGACAATCCTGAACAAGTTGAACCACAGAATGGTGATGATGGTGACCGGGGCTGGGCTAATGTACACAAGGGAGTTATAGCTGGAGCGGCTAATTGGAAGCATGACAACCCTGAAGGGACATCTTCAGCATCTATTGGCCCTGAATACTGCAACCACTCCACCAATTTGCAGACACAGAACGGTACTCACATTGATTCTGGAGATGCATTGGATGCCTCTTCTACTTTTTCTAATGAAGAAGATGAAGATGATCGAGGCACTCATGGTAGTGTCTCATTAGGTTATGATGGGGAAGGAGATGAATCTGAGTCTAAAAGAAGGAAACTGGAATCTTATGCAACAGAGCTGAGTGGAGCTACAAGAGCTATTCGTGAGCCTAGAGTTGTTGTACAGACTACCAGTGAAGTAGATATCCTCGATGATGGCTACCGATGGCGAAAGTATGGGCAAAAAGTTGTTAAAGGAAATCCCAATCCTAGGAGTTACTACAAGTGCACCAGCGCTGGCTGCACGGTGCGGAAGCATGTCGAGAGAGCATCACATGACCTCAAATCTGTGATCACTACTTATGAGGGAAAGCACAATCACGACGTTCCTGCTGCTCGTGCTAGCAGCCACGTCAATGCTGCCGCATCTAACTCTGTTCCTGGGCAAGGTCATGTTCATAGACCTGAATCATCACAAATTCACAATGGAATTGGAAGGCTTGAGAGGCCTTCGATGGGCTCATTCAACTTACCTAGGAGCCAGCAGCTAGGACCTTCCCATGGCTTTTCCTTCGGTATGAATCATCAACCTATGCTCTCAAATCTAGCAATGCCAGGATTCGGACCAGGGCAAGGAAAACATCCTGGTATGCCGGTTCATCCGTTCTTGGCACAGCAACAACAGCACCCTACGGCAAACGAAATGGGTTTTATGTTACCAAAGGGAGAACCAAATGTGGAACCTATTCCTGAACGTGGCTCATCACTATATCAAGAAATTATGAATCACATGTCTCTTGGACCTCATATGTAA | 2217 | 0.4556 | MAGIDDNVTLVGDWGPPSPSPRTLFSRMLGEENVTKSISDPLGSGRTGFMFPGNHEQSEAGKGDIKDSSQDGDSGDQLTYSTFLSDQKSNSRGGLVERMAARAGFNAPRLNTESIRSTDLTLNSDIQSPYLTIPPGLSPTTLLESPVFLANTLAEPSPTTGKFPFISNGNIRYSELSSDAPEKSKENLDDFYASSFAFKPATDSDSSFYYGAARKVSPTTVPQQSVPGIEASVQSENSFQSQSVDAPKVQTENESSLHHQPDFIESPPQNDNGVKSFSGDQRAFNTVGGSIEHSAPPEEQADEVGDQRGNGDSTVAGGTPAEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCLVRKKVERSHEGHMTEIIYKGAHNHPKPTLNRRSTMGSANPNTDMQLDNPEQVEPQNGDDGDRGWANVHKGVIAGAANWKHDNPEGTSSASIGPEYCNHSTNLQTQNGTHIDSGDALDASSTFSNEEDEDDRGTHGSVSLGYDGEGDESESKRRKLESYATELSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARASSHVNAAASNSVPGQGHVHRPESSQIHNGIGRLERPSMGSFNLPRSQQLGPSHGFSFGMNHQPMLSNLAMPGFGPGQGKHPGMPVHPFLAQQQQHPTANEMGFMLPKGEPNVEPIPERGSSLYQEIMNHMSLGPHM | 738 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal5g0439 | 738 | Pfam | WRKY DNA -binding domain | 322 | 378 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lal5g0439 | 738 | Pfam | WRKY DNA -binding domain | 539 | 595 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lal5g0439 | 738 | Gene3D | WRKY domain | 525 | 591 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lal5g0439 | 738 | PANTHER | WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 | 102 | 627 | - | - | |
Lal5g0439 | 738 | ProSiteProfiles | WRKY domain profile. | 533 | 598 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lal5g0439 | 738 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 102 | 627 | IPR044810 | GO:0003700 | |
Lal5g0439 | 738 | MobiDBLite | consensus disorder prediction | 231 | 329 | - | - | |
Lal5g0439 | 738 | MobiDBLite | consensus disorder prediction | 434 | 473 | - | - | |
Lal5g0439 | 738 | MobiDBLite | consensus disorder prediction | 1 | 92 | - | - | |
Lal5g0439 | 738 | MobiDBLite | consensus disorder prediction | 380 | 405 | - | - | |
Lal5g0439 | 738 | Gene3D | WRKY domain | 313 | 381 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lal5g0439 | 738 | ProSiteProfiles | WRKY domain profile. | 316 | 380 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lal5g0439 | 738 | MobiDBLite | consensus disorder prediction | 373 | 508 | - | - | |
Lal5g0439 | 738 | SUPERFAMILY | WRKY DNA-binding domain | 319 | 380 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lal5g0439 | 738 | SUPERFAMILY | WRKY DNA-binding domain | 530 | 598 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lal5g0439 | 738 | MobiDBLite | consensus disorder prediction | 72 | 92 | - | - | |
Lal5g0439 | 738 | MobiDBLite | consensus disorder prediction | 231 | 288 | - | - | |
Lal5g0439 | 738 | SMART | WRKY_cls | 538 | 597 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lal5g0439 | 738 | SMART | WRKY_cls | 321 | 379 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal5g0439 | Lal-Chr5 | 4390777 | 4394845 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal5g0439 | 1 | 732 | WRKY Transcription Factor Family | AT5G56270 | 51.184 | 0.0 | 570 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Lal5g0439 | WRKY | 3e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal5g0439 | K18835 | - | gmx:100127395 | 1142.1 |