Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal5g0432 | ATGACAACTACTGCTTCAGAAGAAGATTCTACAAAACAGATTGTGCTTTTTCAGAATCAGAGTGAGGGACCAAATGGGAATTTCACCAACAACCCTTATCCTATGCCTACAGCCCTATACGATGATCTTGTCCGTGATGGAATCCTCTTCTTGGAAAAGCTTCAATCTTTTCACAACTCATTTGGAACTAAATTTAAGGTTCCAACTATAGGAGGAAAGCCACTAGATCTATATCGCCTTTTCCTTGAAGTAACATCCCGGGGTGGTCTTGAAAAGGCATTCATACATATTTCTCTTCTAATTGTTAAAAATTATAGTTCTCTTATGTCGCAAAACATATTCGTGATTGAAGATCGTAAATGGAGGGAAGTGGTTATGGTCTTTAACTTTCGAGATACCATAACGAGCGCATCGTTTATGGTGCGTAGATACTATCTATCATTGCTTTACCACTTTGAGCAGGTGTATTACTTTCGGAAGCAAGTTCCTCCTTCCTTGACCCCCGATCCCTTGAATAGGAGCCTCGTCAATTACTCTGCAACAATTAGGGAAGGTGGCACTATGAATGGTTTATCTGATCAGGTTACGCAGCTTGGTTCAGTGGTGCTTGGAACAATTGATAGTAAATTTGATGGTGGATATGTAGTTACAGTGAATCTTGGTTCGGAACAGCTGAAGGGTATCCTGTATCATGATCCTACAAATGTGTCCTGGAGTTCTTATACTGAAAGGGTGCTGAGTTCTCAGTACAGAAAGAGATCGAGATTGGCATTACGAGATCCATCTCAGCCTAAGTCAAACAGAAGTGGTTACAATTTCTTCTTTGCCGAGAATTATGCTAGGCTAAAGCCATCATTCCATGGACAAGAGAGGGAAATTAGTAAGAGGATTGGGTTTCTGTGGAGCAATCTGACAGATGCCGAAAGACAGTCTCTAACATGCCCAATGAAGGGTCTTGATATTAAGAAAGACATAACTATAACAATGGCTACATTTGTTGCAGTGAGCAATAATGGCTTAGTTGTTTTGCCTGTTACAAAATATTACTTGTTAGAGAAAACATTTTATGTTAAGGTTTATCAGGAGAAGGGTCTAAAAGACAAAGAAAGATATAGGAGAGAAATGCTCAAATTCAAATCCAATAACTCTTCTCCATAG | 1158 | 0.3938 | MTTTASEEDSTKQIVLFQNQSEGPNGNFTNNPYPMPTALYDDLVRDGILFLEKLQSFHNSFGTKFKVPTIGGKPLDLYRLFLEVTSRGGLEKAFIHISLLIVKNYSSLMSQNIFVIEDRKWREVVMVFNFRDTITSASFMVRRYYLSLLYHFEQVYYFRKQVPPSLTPDPLNRSLVNYSATIREGGTMNGLSDQVTQLGSVVLGTIDSKFDGGYVVTVNLGSEQLKGILYHDPTNVSWSSYTERVLSSQYRKRSRLALRDPSQPKSNRSGYNFFFAENYARLKPSFHGQEREISKRIGFLWSNLTDAERQSLTCPMKGLDIKKDITITMATFVAVSNNGLVVLPVTKYYLLEKTFYVKVYQEKGLKDKERYRREMLKFKSNNSSP | 385 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal5g0432 | 385 | Gene3D | High mobility group box domain | 247 | 384 | IPR036910 | - | |
Lal5g0432 | 385 | PANTHER | HIGH MOBILITY GROUP B PROTEIN 9 | 25 | 92 | - | - | |
Lal5g0432 | 385 | PANTHER | HIGH MOBILITY GROUP B PROTEIN 9 | 358 | 384 | - | - | |
Lal5g0432 | 385 | PANTHER | HIGH MOBILITY GROUP B PROTEIN 9 | 115 | 311 | - | - | |
Lal5g0432 | 385 | SUPERFAMILY | ARID-like | 48 | 166 | IPR036431 | GO:0003677 | |
Lal5g0432 | 385 | SMART | bright_3 | 45 | 158 | IPR001606 | GO:0003677 | |
Lal5g0432 | 385 | SMART | ARID_2 | 41 | 153 | - | - | |
Lal5g0432 | 385 | Gene3D | - | 41 | 167 | IPR036431 | GO:0003677 | |
Lal5g0432 | 385 | PANTHER | HIGH MOBILITY GROUP B PROTEIN 10-RELATED | 115 | 311 | - | - | |
Lal5g0432 | 385 | PANTHER | HIGH MOBILITY GROUP B PROTEIN 10-RELATED | 25 | 92 | - | - | |
Lal5g0432 | 385 | PANTHER | HIGH MOBILITY GROUP B PROTEIN 10-RELATED | 358 | 384 | - | - | |
Lal5g0432 | 385 | Pfam | ARID/BRIGHT DNA binding domain | 50 | 153 | IPR001606 | GO:0003677 | |
Lal5g0432 | 385 | CDD | ARID_HMGB9-like | 46 | 153 | IPR045303 | GO:0003677 | |
Lal5g0432 | 385 | CDD | HMGB-UBF_HMG-box | 264 | 375 | - | - | |
Lal5g0432 | 385 | ProSiteProfiles | ARID domain profile. | 44 | 157 | IPR001606 | GO:0003677 | |
Lal5g0432 | 385 | SUPERFAMILY | HMG-box | 247 | 310 | IPR036910 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal5g0432 | Lal-Chr5 | 4307753 | 4314666 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal5g0432 | 24 | 384 | ARID Transcription Factor Family | AT3G13350 | 42.935 | 9.24e-87 | 264 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | ARID | Lal5g0432 | ARID | 3.1e-15 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal5g0432 | - | - | adu:107491521 | 389.423 |