Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0406 ATGGCGAAGAAGCAGAGACCAATTTCTGTATCTCCTTCACCAGAAAAACTCAACAATGCTGAAGAAGATGCTACCAATGTTCATCAAGTTCAACCAATTTCCATTCATGAACCCATCTCCTCCGATCCAAACCCTAATTCCAAATCCCAAAAGCGTCCAAATGAAAACAACAATGTCCCTTTGAGTCCAAAACGGACCAAAACAGATGCTGCTGTTGTTGTAGATTCAAATTCAAAGCCTCGTTCTCACCGTTTATGGAGCTTTGATGATGAAGTTACAATTTTGAAAGGTGTGCATGATTTCATATCTGAAAATGGATCTGATCCTTATAAATCTATTGATGATTTTCACAATTTCATTAAGAAATCATTGCATGTTCAAGCTTCAATTACTCAGTTGAAGGATAAGATTCGAAAGTTGAGGCAAAAGTTCGAGAAGAAGAGTGAGAGTCCTTCTTTCACTGATCCTCATGATTCTGAAATATTTGAATTGTCAAAGAAGATTTGGGGCAATGCTGAAGCTGGATACTTAAATGGAGCACTGAAAAAAACTGTGTCTGATGAGAATAAGGAAAGAGAAAATGTGAAAGTAGTGGATTTGGAGAAAGATGCAGAGATCGAAAATGACGAAGAAGAGAATGAAACAACTTCGTATTTAATGAAAGTTTTTCAATTGTATGGGTTGGATAAGGATGTCATAAAGAAAGGTATTAAGCTATTAGGAGATTCAAAGAGGATGGAGTTGAAGAAGCTTTGGAAGGAAGTTCAAAGTGCTGAGTCGGAGCTTCATGTGAGACGTGTGGAACTCGTTGCTAAACATTCTCGGTTCATATTCGAGGCATTCCAGTCATCTAACCATTAG 861 0.3763 MAKKQRPISVSPSPEKLNNAEEDATNVHQVQPISIHEPISSDPNPNSKSQKRPNENNNVPLSPKRTKTDAAVVVDSNSKPRSHRLWSFDDEVTILKGVHDFISENGSDPYKSIDDFHNFIKKSLHVQASITQLKDKIRKLRQKFEKKSESPSFTDPHDSEIFELSKKIWGNAEAGYLNGALKKTVSDENKERENVKVVDLEKDAEIENDEEENETTSYLMKVFQLYGLDKDVIKKGIKLLGDSKRMELKKLWKEVQSAESELHVRRVELVAKHSRFIFEAFQSSNH 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0406 286 Coils Coil 190 210 - -
Lal5g0406 286 Pfam Protein of unknown function, DUF573 83 170 IPR007592 GO:0006355
Lal5g0406 286 Coils Coil 130 150 - -
Lal5g0406 286 PANTHER STOREKEEPER PROTEIN 17 283 - -
Lal5g0406 286 MobiDBLite consensus disorder prediction 11 64 - -
Lal5g0406 286 MobiDBLite consensus disorder prediction 1 76 - -
Lal5g0406 286 PANTHER BNAANNG10740D PROTEIN-RELATED 17 283 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0406 Lal-Chr5 4009262 4010122 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0406 51 170 GeBP Transcription Factor Family AT1G61730 42.742 1.35e-21 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Lal5g0406 DUF573 7.9e-27 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0406 - - lang:109329341 331.643