Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal5g0403 | ATGGGAAATTATTGTGGAAAACCAGTTGCTCATGTATCTTCTAATTTTACTGGAAGTAAAAACAAGAGTGTGAATAAGACAAAGCAGGATTTGTTTTCTTCTCATCAAAAAGCAGCTTTGCAAACTTCACAATCAAATGTTAACAAATCTATCTCCAATAACCTTAAGTCCTTTAGCTTCAATGATCTAAAGGAGGCTACAAAGAACTTCAGGAGAGAAAATTTAATCGGAGAAGGAGGGTTTGGGTATGTATTCAAGGGATGGATCGACGAGACCACTTATGCTCCAACAAAGCCGGGGAGTGGAATGGTAGTGGCCATTAAGAATCTTAAGCCAGAAAGCTTTCAAGGCCACAAAGAATGGCTTACCGAAATCAATTATCTCGGGCAGCTTCAACATGAAAATCTGGTGAAACTTATTGGTTATTGTTTGGATGGTAAAAACAGGCTTCTAGTTTATGAGTTTATGCAAAAAGGAAGCTTGGAGAATCACTTATTCAGAAAAGGTGTTCAACCGATAGCCTGGACTACTAGGATCAATATCGCGATTGGTGTAGCAAGAGGAGTAACATTCTTACATTCACTAAATGCAAATGTTATCTTTCGCGATTTAAAGGCTTCGAATATCCTACTTGATTCAGATTTCAATGCAAAGCTTTCTGATTTTGGTTTGGCAAGAGATGGTCCTACAGGAGATAACACACATGTTTCAACAAGAGTTATTGGAACTCAAGGTTATGCTGCACCAGAGTATGTTGCTACAGGTCATTTGACCCCAAGGAGTGATGTATACAGCTTTGGTGTTGTATTGTTAGAGTTACTAACCGGAAGGCGTGCAGTAGAAGACAGCCGACCCGGATTTTCGGACGAAACTTTGGTGGATTGGGCTAAGCCTTTTCTGAGTGATAGCAGAAGAGTTTTGAGAATCATGGATACTAGGTTGGGTGGTCAATACTCTAAGAAAGGAGCACAAGCTGCAGCTGCACTTGCATTGCAATGCCTAGGCACAGATCCAAAATTTAGACCACCTATGGTAGATGTTCTAGCAGCATTGGAAGGACTCAATTCTTCAAATACAATGCCACCAATGGCACAAAAATCAGGAACTGAGATTCATGCAACCAAACATTCTGGTCATTCACACAATTGA | 1149 | 0.4012 | MGNYCGKPVAHVSSNFTGSKNKSVNKTKQDLFSSHQKAALQTSQSNVNKSISNNLKSFSFNDLKEATKNFRRENLIGEGGFGYVFKGWIDETTYAPTKPGSGMVVAIKNLKPESFQGHKEWLTEINYLGQLQHENLVKLIGYCLDGKNRLLVYEFMQKGSLENHLFRKGVQPIAWTTRINIAIGVARGVTFLHSLNANVIFRDLKASNILLDSDFNAKLSDFGLARDGPTGDNTHVSTRVIGTQGYAAPEYVATGHLTPRSDVYSFGVVLLELLTGRRAVEDSRPGFSDETLVDWAKPFLSDSRRVLRIMDTRLGGQYSKKGAQAAAALALQCLGTDPKFRPPMVDVLAALEGLNSSNTMPPMAQKSGTEIHATKHSGHSHN | 382 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal5g0403 | 382 | ProSitePatterns | Protein kinases ATP-binding region signature. | 76 | 108 | IPR017441 | GO:0005524 | |
Lal5g0403 | 382 | Gene3D | Phosphorylase Kinase; domain 1 | 43 | 155 | - | - | |
Lal5g0403 | 382 | MobiDBLite | consensus disorder prediction | 363 | 382 | - | - | |
Lal5g0403 | 382 | SUPERFAMILY | Protein kinase-like (PK-like) | 44 | 360 | IPR011009 | - | |
Lal5g0403 | 382 | PANTHER | TYROSINE KINASE FAMILY PROTEIN | 18 | 379 | - | - | |
Lal5g0403 | 382 | Pfam | Protein tyrosine and serine/threonine kinase | 73 | 348 | IPR001245 | GO:0004672|GO:0006468 | |
Lal5g0403 | 382 | Gene3D | Transferase(Phosphotransferase) domain 1 | 156 | 376 | - | - | |
Lal5g0403 | 382 | CDD | STKc_IRAK | 76 | 354 | - | - | |
Lal5g0403 | 382 | PANTHER | OS01G0588500 PROTEIN-RELATED | 18 | 379 | - | - | |
Lal5g0403 | 382 | SMART | serkin_6 | 70 | 351 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lal5g0403 | 382 | ProSiteProfiles | Protein kinase domain profile. | 70 | 354 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal5g0403 | Lal-Chr5 | 3990144 | 3994033 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal5g0403 | 41 | 351 | Glycoside Hydrolase | AT3G07070 | 50.949 | 2.73e-105 | 314 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Lal5g0403 | PK_Tyr_Ser-Thr | 4.7e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal5g0403 | - | - | gmx:100800654 | 600.897 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal5g0403 | 5 | 3990144 | 3994033 | Lal18g1474 | 18 | 16705106 | 16709046 | PCT | |
Lal18g1474 | 18 | 16705106 | 16709046 | Lal5g0403 | 5 | 3990144 | 3994033 | PCT |