Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal5g0377 | ATGGCAACAAAAGGTTTTGAACCTTGTCATTCTGAATCTTCTACAAGTATGTCTGTCACCTCCAATAATGAAATAGATCATCAGGCTTATTCCAATTCAGATTCCCATATGGGGTTCGATTTTGTGAAGCTATTAAAGGATGACGATTTGATTGGTGGGTCTATGATAGAACTCGATTTATTCAATAGCAACAACGAAGTGAAAGATAAGAATATCGACGAAAATACATTAGACTCAAGGACTTTCTCGTGCAACTTTTGTAAGAGAAAATTTTCAACTTCTCAAGCTTTGGGAGGACACCAAAACGCACACAAGCAAGAGCGCGCAGTTGCAAAACGTTGCCAAAATGTCGATAATAATTATTTGGGTCTCCCTCAGTTTCCTTATTACCCTTTTACTAACCTTTCCACACAACCACCATACCCTTTGTATGGGTCCTATAATAATAGGGCACTAGGACTTGGGGTGCCTTCTTATCCTTGGACCACACCTGACTTAAGGTATGGTCCTAATGATAGTGGGTGGCCAAGCCCAATGCAAGGGATGCTAAATCAATCACTACCCCATGATAGATTGAATAGTATAGAGGGTTTGCAAGATCATGATCATGGTATTGTTCGTCCTAAACTTCACTTTGGAGATTCTCTTAGTAATGTTGCTACTATAAGTTCAAGCTCACCCGTTAAAATGACAACTATGACAAACAAGGATGATCATCATTCCAACCAAGAAGAATTAACCTCAATTCCTAAATCTTTTGTTCTTGATTTGTCACTTAAGCTTTAA | 786 | 0.3855 | MATKGFEPCHSESSTSMSVTSNNEIDHQAYSNSDSHMGFDFVKLLKDDDLIGGSMIELDLFNSNNEVKDKNIDENTLDSRTFSCNFCKRKFSTSQALGGHQNAHKQERAVAKRCQNVDNNYLGLPQFPYYPFTNLSTQPPYPLYGSYNNRALGLGVPSYPWTTPDLRYGPNDSGWPSPMQGMLNQSLPHDRLNSIEGLQDHDHGIVRPKLHFGDSLSNVATISSSSPVKMTTMTNKDDHHSNQEELTSIPKSFVLDLSLKL | 261 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal5g0377 | 261 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 84 | 104 | IPR013087 | - | |
Lal5g0377 | 261 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Lal5g0377 | 261 | Gene3D | Classic Zinc Finger | 62 | 122 | - | - | |
Lal5g0377 | 261 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 82 | 109 | IPR013087 | - | |
Lal5g0377 | 261 | PANTHER | AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN, PUTATIVE-RELATED | 22 | 261 | - | - | |
Lal5g0377 | 261 | PANTHER | ZINC FINGER PROTEIN JAGGED | 22 | 261 | IPR045320 | GO:0003700 | |
Lal5g0377 | 261 | SUPERFAMILY | beta-beta-alpha zinc fingers | 79 | 110 | IPR036236 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal5g0377 | Lal-Chr5 | 3809486 | 3810271 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal5g0377 | 74 | 159 | C2H2 Transcription Factor Family | AT1G80730 | 45.556 | 5.40e-19 | 81.3 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Lal5g0377 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal5g0377 | - | - | lang:109329362 | 432.565 |