Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0376 ATGATTTATTGTTCCAAAGTTTCAATTTTTTCTCTTTTTTGGTTCCTCTCACTCTTCTCTTTGTCTCTCTCCTCTGATAATATGAAGAAGAAGCTCGATACCCGTTTCCCTGCTAAAAGATCTCTGTACCATACAAAGTATGTACGTAAATATGTAAAGGAACTGATTTTTGACATCAAAGTTATAGGTCAGTTGAACAAAGGTGCACTGCAATTATCTATATATTGTACCTCTGCATCATATATGGCAGCACCACAACATGGCTTAGAAGCAAATATACCCCCTTGTCAATCCTACGTTCGGATAAAGAAGATAATGCAAGCTGATGAGGATGTCGGAAAGATAGCCCTAGCAGTTCCTGTTTTAGTGTCTAAAGCTCTGGAGTTATTTTTGCAAGATCTTTGTGATCGGACTTATGAAATAACTCTTCAGAGAGGAGCAAAGACCATGAATGCATTGCATTTAAAACATTGTGTACAAAGCTTTAATGTCTTTGACTTTCTGAGAGACATTGTTAGTAGGGTTCCTGACTATGGCCATGGCCATTCTGAGGCTGGTGTTGATGATCGTGCCCTTTCAAAGAGAAGGAAAGCTGCTGCGGGTAATGATTGCAATGACAGTGATGAAGAAGCTAAGAGGATTAAAATGCTTGAATTGGGTCATACGAGCAGTACTGGTAGGGGAAGAGGCCGATGTAGAGGAAGAGGCCGTGGTCGAGGGGCTCGAACTATAGCGAGAGAAACCCATCATCAGCAGTTTGAATCCGAGCCTTTCACTTTCGTTCAACCCAGTAGCAAAGATGTTCCTAATACAAGCATGGCAATAGACAATGGTCCAGAATCCAAAGAGTTATTATCTAAGGAGAACATTGCAGTTCCTGAGGAAAATACTCAACCACTCCTTAACATTGATCTAAATGCCAACTTAAATGAAATCGAGGACAAAAATGGTAGCGCAGCAACTCAAGCCTCGTTGTCTGAACCGGCAACAGAGACTAAGCATGAAGAAATTCCAGGTTGGTCCCTTGCTGATGTGGAGATGATGGCCATTGATACTATGCAGCTTGCAAACCTTGGTAGTGGACAAGATTATGACGAGGAAGATTATGACGAGGAAGGTTAA 1122 0.4135 MIYCSKVSIFSLFWFLSLFSLSLSSDNMKKKLDTRFPAKRSLYHTKYVRKYVKELIFDIKVIGQLNKGALQLSIYCTSASYMAAPQHGLEANIPPCQSYVRIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNALHLKHCVQSFNVFDFLRDIVSRVPDYGHGHSEAGVDDRALSKRRKAAAGNDCNDSDEEAKRIKMLELGHTSSTGRGRGRCRGRGRGRGARTIARETHHQQFESEPFTFVQPSSKDVPNTSMAIDNGPESKELLSKENIAVPEENTQPLLNIDLNANLNEIEDKNGSAATQASLSEPATETKHEEIPGWSLADVEMMAIDTMQLANLGSGQDYDEEDYDEEG 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0376 373 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 101 159 IPR003958 -
Lal5g0376 373 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 100 372 - -
Lal5g0376 373 SUPERFAMILY Histone-fold 106 175 IPR009072 GO:0046982
Lal5g0376 373 Gene3D Histone, subunit A 98 174 IPR009072 GO:0046982
Lal5g0376 373 PANTHER HISTONE SUPERFAMILY PROTEIN 100 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0376 Lal-Chr5 3796289 3806923 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0376 100 359 CCAAT-HAP5 Transcription Factor Family AT3G12480 47.653 3.37e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Lal5g0376 CBFD_NFYB_HMF 2.5e-16 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0376 K21752 - gmx:100810093 363.614