Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0346 ATGGCTGATAAAATGAATAATAATGGTGAAAACTATGAGATGAAATTGATGTTAGTGAAGATGAGAAATATTAATGAAGGAGAGGAGTTTGATTTTGAAGAAATTGATTTTGGATCATTAAACGAAGATGAAGTAAAGAATTATAGAGAGGGATTTAGGGATAAGAAAAATGAATTAGTTCGAAAAAAAGCTCCAAGAAAAAAAACGAGATTTGCTTGTTTAGCAAGAATGAGAATTCACATTGACAAGGAGAAATGTGATTGGTATGTGAGTTATTTTGTTGATGATCATAATCATGAATTGGTTGGCGAACATTATGGTGGGATGATAGCGTCAAACCGAAGTATGACAGAAACAGACGTCGCTTTGATGAACACAATGAGAGAAGTTGGAATTGGAACAAGCAAAATTTTTGGTTCATTCGCTGGTCAATCTGGTGGATATCGGTATATTGGATTCTCTAAGAAATATATGTATAATCAAATTCAGAAACAAAGAAGAATAGGAAATGGTGACGCAAAATCAGCATTACAATACTTGAAGAAACAATCAAAATCAGATTTTGCAATTGTAGATGAAGAAAGTAAGTTGCAACAATTATTTTGGGCGGATGGATGCAGCATTTTTGACTACTCAATTTTTGGAGATGTTCTAACTTTTGATGCAACCTATGGTCGAAACAAATACAAGTTTCCAGTGGTCATTTTTTCTGGTGTGAACCATCACAAGCAAACAATAGTATTTGATGCTGGTATTGTGTCTAACGAGACAGAGGAAACTTACGTTTGGCTTCTAGGAAATTTCTTGGAGGCAATGAATGAGAAACATCCAAAGTGTGTTACCACTGATGGTGACTTTTCGATGAAGAATGCAATCAAAAGAGTTTTCCCTGCAGCTCATCATAGACTATGTGCTTGA 918 0.3453 MADKMNNNGENYEMKLMLVKMRNINEGEEFDFEEIDFGSLNEDEVKNYREGFRDKKNELVRKKAPRKKTRFACLARMRIHIDKEKCDWYVSYFVDDHNHELVGEHYGGMIASNRSMTETDVALMNTMREVGIGTSKIFGSFAGQSGGYRYIGFSKKYMYNQIQKQRRIGNGDAKSALQYLKKQSKSDFAIVDEESKLQQLFWADGCSIFDYSIFGDVLTFDATYGRNKYKFPVVIFSGVNHHKQTIVFDAGIVSNETEETYVWLLGNFLEAMNEKHPKCVTTDGDFSMKNAIKRVFPAAHHRLCA 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0346 305 PANTHER OS02G0262500 PROTEIN 49 304 - -
Lal5g0346 305 Pfam FAR1 DNA-binding domain 48 102 IPR004330 -
Lal5g0346 305 Pfam MULE transposase domain 217 304 IPR018289 -
Lal5g0346 305 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 49 304 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0346 Lal-Chr5 3149603 3150752 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal5g0346 MULE 5.6e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0346 - - lang:109327968 390.963