Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0333 ATGTATCAATATTCACCCTTCAACATTGTGGATAATCCTCTTCAAACTCAACAATATGATCAACATCAAATTGATGTTCCTAATTGGTGTTTTGAGTTTCCAAAAACAACAAACACAAACTCATGCATGATGTTTTCACAACAAGTTTGTGGAGATAACTTCACCAATTTCACTAAAAAAGATACACCATCATCTCAATTCACAAGAAGCTCCTTGCACTCTAGTAGTGCAGATAGTGAATGTTCTTCTGAAAAAAATAGTAACTTTGCTTCTTATGCTGAAAAATACAGTAACTTTCAGCTTGATAATATTGCATTTCATGAGCATTTTTCACAAGAACGTGATAAATTATTTAGGAATGATGCTGCCGAAGGTGAGAGGGGCCTTGAAATCTCCTTTCAAAGAAATCAGCCAGAAAAGCAATGTCCTCAACTTCGTGAACTTAACTGTGTCACTTCTAGAAGAATTCCAAATGGTAAAAGAAGAATAAGATGGACCAAGGATCTACATGAAACATTTATGATGATTGTTAATCGACTTGGTGGCCCAGAAAAGGCAAAGCCTAAGGCTATACTAGAAGAGATGATGAAATCAGATAATTTGCTTTCCATTTCTCATGTTAAAAGTCATTTGCAGAAATGTAGGACTACAATAAACATGCACAAAACTATGCAGGAAAAATCTGAGGAAGGACATATAACAGATGGGGTCACTGAGCTTCAAGTCAAAATCCATATGCAAATTGAAGAGTCAAGGAAACTGCAGCTTGAAGTCAGGAGAAGTATTCACAAACAACTAGAGATGCAACGAAATTTGCAAGTGCTAATTCAACAGCAGGGGAAGCAGCTCAAAACAATGTTAGATAATCAAAAGGAAAGAACCAAATTGGAGAAAATCCTTGGCACAGAACTGAATGTGAATGACTCAGAATGA 933 0.3591 MYQYSPFNIVDNPLQTQQYDQHQIDVPNWCFEFPKTTNTNSCMMFSQQVCGDNFTNFTKKDTPSSQFTRSSLHSSSADSECSSEKNSNFASYAEKYSNFQLDNIAFHEHFSQERDKLFRNDAAEGERGLEISFQRNQPEKQCPQLRELNCVTSRRIPNGKRRIRWTKDLHETFMMIVNRLGGPEKAKPKAILEEMMKSDNLLSISHVKSHLQKCRTTINMHKTMQEKSEEGHITDGVTELQVKIHMQIEESRKLQLEVRRSIHKQLEMQRNLQVLIQQQGKQLKTMLDNQKERTKLEKILGTELNVNDSE 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0333 310 Gene3D - 159 218 - -
Lal5g0333 310 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 15 304 - -
Lal5g0333 310 MobiDBLite consensus disorder prediction 62 84 - -
Lal5g0333 310 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 160 216 IPR006447 GO:0003677
Lal5g0333 310 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 15 304 IPR044848 GO:0003700
Lal5g0333 310 SUPERFAMILY Homeodomain-like 159 218 IPR009057 -
Lal5g0333 310 Pfam MYB-CC type transfactor, LHEQLE motif 246 292 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0333 Lal-Chr5 3011793 3015339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0333 159 290 G2-like Transcription Factor Family AT4G28610 46.269 3.51e-29 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal5g0333 Myb_CC_LHEQLE 1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0333 - - lang:109344853 359.762