Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0330 ATGGATTTGATAGAGATATTTAGTACATTTTGTGAACTAAGTCCTTTGACTATGGGTAGAGGCAAAGGAAAAGGGAAGAATCAATCTGTTATTGCTGCTATGAGTGAGGAACCTAGAAAAAGAGGAAGACCACTTAAGCCACTTACATATGAAATTGAAGAAGTAGAAATAACGGAAAAGATAGAGAAAGATGAAGAGAATGAAAGAAAACGAAAGGAAAATTCTGATTCTGGGGAAAATGTTTTTGCTCTCAAGGATCTATATAGGACCTTAAACTACCCATTGGTGCTACAAGGATGGAATGGTAGTGATCCTTGTGAAGAGTCTTGGGCCGGAGTAACTTGTTCTGGATCATCAGTTATTCACCTGTTCTTATCAGCACACTTCAATGTCAAGATTTTGGAACTTACTTCCATATTGAATCTAAGCCACAATTTCTTAAGTGGACCCATCGGCGATGTATTTAATGGGTTAGATAATCTCAAAGAATTGTATGCCTTCTTCTCCTGGTCTTTTGGTGTTGCATTTGAATTTCAATAA 540 0.3685 MDLIEIFSTFCELSPLTMGRGKGKGKNQSVIAAMSEEPRKRGRPLKPLTYEIEEVEITEKIEKDEENERKRKENSDSGENVFALKDLYRTLNYPLVLQGWNGSDPCEESWAGVTCSGSSVIHLFLSAHFNVKILELTSILNLSHNFLSGPIGDVFNGLDNLKELYAFFSWSFGVAFEFQ 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0330 179 PANTHER OS01G0253100 PROTEIN 78 122 IPR045271 GO:0004714|GO:0006468
Lal5g0330 179 PANTHER OS01G0253100 PROTEIN 135 168 IPR045271 GO:0004714|GO:0006468
Lal5g0330 179 Pfam Leucine rich repeat N-terminal domain 83 116 IPR013210 -
Lal5g0330 179 PANTHER STRUBBELIG-RECEPTOR FAMILY PROTEIN 135 168 - -
Lal5g0330 179 PANTHER STRUBBELIG-RECEPTOR FAMILY PROTEIN 78 122 - -
Lal5g0330 179 SUPERFAMILY L domain-like 100 165 - -
Lal5g0330 179 Gene3D Ribonuclease Inhibitor 78 169 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0330 Lal-Chr5 3002497 3006662 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0330 72 164 Strubbelig Receptor Gene Family AT5G06820 35.135 2.35e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0330 - - gmx:100793182 107.457