Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0329 ATGTTGAAAGATAAGCTGAAACGAAGCATTGTGAGAGTGAAAATAAACACTGTTATGACTGAAATCTGGTCTGGTTCAGCTGTGTTGGACCTTTCGTACAATAATTTCTCAGGAGATCTACCACGATCATTTGGTTCCTTATCAAACCTTTCTATATTGTTCCTGCAGAATAACAGATTCACTGGCTCAGTCGCCTACTTGGGTGAACTTCCTCTTACAGATTTGAACATTCAAGACAATGTGTTCAGTGGCATTCTTCCACATCGTTTTCAGTTCATACCAAATTTACGGATTGGAGGGAATAAATTCCATGAAGTAGACAACTCTCCTTCCTGGACTTTTCCTTTGCAAATTGTACCAGTTGAGCATAATATTAGTCATCCACCCACAACTCAGGCAAGTGCCATCAAGAACTATCCTCCTCCCAAAGTAAGTGAACACAAGAAGAAACGTATGAGTCCTGGAAGAATAGCTTTTATGGTTGGTGGAGGAACACTAATAGCAACAGGTGTGGCACTATTAGTGGCAATCCATTTGAATAAATTGCGTGCACAGAATCTGAACATGAAGAGGTTGGAAAGCAGCCACAGCTCTATGAATTCTCGTCCAACAAGTGCAACCATAGAGGTCTCTCCTACTGTATTAGATGAGAGCCCACCAGTTCCACCTGTTAATTCTGCAACTGTATCCCTTCTTGGTCCAATGCAATTGGCTTCCATGCATTTCAACAATACAGAGGAACCGTTACGGAGGAGTTTTTCCAAAAGAGGCAGATCCACTGGAAGGATGAAAGTTTACACGGTAGTGGAGCTTCAGTTGGCCACTAACAGATTCAATGAAGGCAACCTTCTGGGAGAGGGATCACTTGGCCCTGTGTACAGAGCTGAATTTCCGGATGGCAAAATTTTGGCGGTGAAGAATATAAATATGGAGTGCCTATCATTCAGAGAAGAGGAAAAGTTCTTAGATGTCATTTGCACAGCTTCCCGATTGAAGCACCCCAACATCGTAGCTCTCAATGGTTACTGTTTGGAGCGGGGAAAGCATCTTCTTGTATATGATTATATTAGAAATTTAACTCTAAAAGATGCTCTTCATAGTGGAGCATACAAACCTCTATCGTGGGTCCTTCGTCTCCGGATTGCTCTAGGTGTTGCTCAGGCTCTCGACTATTTGCATTCAACATTGTCCCCTCCTGTAGCCCATGGCAACTTCAAGGCTGCCAACATTCTACTGGACGAAAATTTGATGCCTCATGTTTGTGACTGTGGCTTGGCTATTTTGAGCCCACCGAGGAGCAAGCTACTTACAATTCCTGTAAGTTCTTCTAAGAATCAGCTTCATGCTGAGATAAAGGTGACATCTAAGGCTACTGAGAATACTATTGGAGACAGAGGCTACACTGAACCTGAGCATGGCCGACCAGGAACTGGAAGCAGAAAGAGAGATGTGTTTGCCTTTGGGGTATTGCTTCTAGAATTGTTAACAGGAAGGACACCTTTTGATGGGAAGGGAAAGCTTAGGAGCCATTATGCTTGCAAGATGGCTCTGAAGTTTTTCCTTTCCCGTCCTTCCCCTCCAAAACTCAACTCGCAAATGAACCCTTATAATTTCTTTCAACACAGTTCCAGGCCAAGGGAGGAGCAATATCTAGCAAAATGGGCTTCATCCAGGCTTCATGACAGCGCAAGTTTGGAACAGATGGTGGATCCCAGTTTTAAAAGTGCATTTTCATCCAAGCTTCTTTCTCCTTATGCTAATATCATTGGCCGCTGCATACAGCCTTTAAGGCAAGTACGTCCTCCAATGTCGGAAGTGGTGGACTTTCTTGCATCTTTTTCACAGAAGTTCAACATTGCTAACAGAGGTGAAGCAAATTGTACCGTAGTTGATCCATTTGAGAGGTCTTTCCGTTCAACCAACACACGCTTTATTGGCTCACCGGTAATGAGCCATGTATCTAATTGA 1968 0.4329 MLKDKLKRSIVRVKINTVMTEIWSGSAVLDLSYNNFSGDLPRSFGSLSNLSILFLQNNRFTGSVAYLGELPLTDLNIQDNVFSGILPHRFQFIPNLRIGGNKFHEVDNSPSWTFPLQIVPVEHNISHPPTTQASAIKNYPPPKVSEHKKKRMSPGRIAFMVGGGTLIATGVALLVAIHLNKLRAQNLNMKRLESSHSSMNSRPTSATIEVSPTVLDESPPVPPVNSATVSLLGPMQLASMHFNNTEEPLRRSFSKRGRSTGRMKVYTVVELQLATNRFNEGNLLGEGSLGPVYRAEFPDGKILAVKNINMECLSFREEEKFLDVICTASRLKHPNIVALNGYCLERGKHLLVYDYIRNLTLKDALHSGAYKPLSWVLRLRIALGVAQALDYLHSTLSPPVAHGNFKAANILLDENLMPHVCDCGLAILSPPRSKLLTIPVSSSKNQLHAEIKVTSKATENTIGDRGYTEPEHGRPGTGSRKRDVFAFGVLLLELLTGRTPFDGKGKLRSHYACKMALKFFLSRPSPPKLNSQMNPYNFFQHSSRPREEQYLAKWASSRLHDSASLEQMVDPSFKSAFSSKLLSPYANIIGRCIQPLRQVRPPMSEVVDFLASFSQKFNIANRGEANCTVVDPFERSFRSTNTRFIGSPVMSHVSN 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0329 655 Gene3D Transferase(Phosphotransferase) domain 1 356 630 - -
Lal5g0329 655 PANTHER OS01G0253100 PROTEIN 542 648 IPR045271 GO:0004714|GO:0006468
Lal5g0329 655 PANTHER OS01G0253100 PROTEIN 30 519 IPR045271 GO:0004714|GO:0006468
Lal5g0329 655 MobiDBLite consensus disorder prediction 129 151 - -
Lal5g0329 655 MobiDBLite consensus disorder prediction 460 480 - -
Lal5g0329 655 Pfam Protein kinase domain 279 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g0329 655 SUPERFAMILY Protein kinase-like (PK-like) 259 610 IPR011009 -
Lal5g0329 655 ProSiteProfiles Protein kinase domain profile. 278 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g0329 655 Gene3D Phosphorylase Kinase; domain 1 242 355 - -
Lal5g0329 655 Gene3D Ribonuclease Inhibitor 22 136 IPR032675 -
Lal5g0329 655 SUPERFAMILY L domain-like 28 106 - -
Lal5g0329 655 PANTHER STRUBBELIG-RECEPTOR FAMILY PROTEIN 30 519 - -
Lal5g0329 655 PANTHER STRUBBELIG-RECEPTOR FAMILY PROTEIN 542 648 - -
Lal5g0329 655 MobiDBLite consensus disorder prediction 465 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0329 Lal-Chr5 2998587 3002193 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0329 19 655 Strubbelig Receptor Gene Family AT5G06820 45.101 4.85e-161 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lal5g0329 Pkinase 4.6e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0329 - - gmx:100775254 725.317