Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0327 ATGGATAAGAATGAGACAGATATTTTTGCTACTATGGCAGGGACTAGTTTCTACACCTCTTGTCTTTTCTCTCCGAGCAACTTAGGGAGATCTTGGTCGGTATTAAAAACTCGCAATGAAAGGGCCGTGCCATGGAAACTACCCCAAAGGAGATGTTTCAGAATTAAAGCAGAAGTGGATTATGTAAACGCTGAACAAGCGAAGGATCTTGTAGCAGTTGAAGGATATACAGTTCTTGATGTGCGGGATAGAATTCAGTTTGAGCGAGCTCATATAAAATCATCTTATCATGTGCCGCTTTTTATCGAAAATGAAGACAATGATCCTGGTACAATTTTAAAAAGGACTCTGCACAATAATTTTTCGGGGCTGTTCTATGGGTTACCCTTCACCAAGCCAAATCCTGATTTTGTACAATCTGTTAAGAGCCAGTTTCCACCGGAAAGTAAACTCTTGGTTGTATGCCAAGAAGGACTGAGGTCTGCAGCAGCAGCAAGTAAGTTAGAACAAGCCGGTTTTTCAGATATAAAAAGCATAACATCTGGCCTTCAAAAAGTGAAACCAGGGACATTTGAGTCTGTTGGCTCCATAGAGTTGCAGAATGCTGGCAAAGCTGGTTTGGTAACAATCCAAGGGAAAATCTCAGCTGTGTTGGGAACAGTTCTTGTTTGTGCATATTTATTCATTACCTTCTTCCCTGACCAAGCAGAGAAGATAATCCAATTAGTACCTGCAAGCTAA 741 0.4103 MDKNETDIFATMAGTSFYTSCLFSPSNLGRSWSVLKTRNERAVPWKLPQRRCFRIKAEVDYVNAEQAKDLVAVEGYTVLDVRDRIQFERAHIKSSYHVPLFIENEDNDPGTILKRTLHNNFSGLFYGLPFTKPNPDFVQSVKSQFPPESKLLVVCQEGLRSAAAASKLEQAGFSDIKSITSGLQKVKPGTFESVGSIELQNAGKAGLVTIQGKISAVLGTVLVCAYLFITFFPDQAEKIIQLVPAS 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0327 246 CDD RHOD 66 187 - -
Lal5g0327 246 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC 12 245 IPR044615 -
Lal5g0327 246 Gene3D - 49 191 IPR036873 -
Lal5g0327 246 ProSiteProfiles Rhodanese domain profile. 72 195 IPR001763 -
Lal5g0327 246 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 57 184 IPR036873 -
Lal5g0327 246 SMART rhod_4 62 192 IPR001763 -
Lal5g0327 246 Pfam Rhodanese-like domain 64 186 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0327 Lal-Chr5 2982744 2987579 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0327 20 239 Sulfurtransferasese or Rhodanese AT2G42220 66.960 6.70e-109 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0327 - - gsj:114398290 371.703