Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0320 ATGAATCTCCAAAGCAACTTTCTATCTCTTTTGGTTCCCCTTATATCAGTTTTTGCATCATTTTATCTCATAAATCCAAATCCACATTTTCTCAATATTTTCAAAGACTTCAGTGTCACAACATTGTCATCATCATTTTCCTATTTGACACTTCCTTTAACTCACAACTTTGGAAGAAACCATCATCATAGACCACACAAGAAACATGATGGTAGTGGAGATGCTAGTACTATATGTGATGATTTCCCTCAAGGGATTCCACCTCCAAGTACCAATACCACTTCATATATTTGTGTTGATCGAAAAGGGTGTTGTAATTTCACAACAGTACAAGCAGCAGTGAATGCAGTTCCAGATTTTAGTGATAAGAGAACTATAATATGGATCAATAGTGGCTTCTACTATGAGAAAGTTATGGTGCCTAAAACCAAACCAAACATTACATTTCAAGGACAAGGCTATCCTTCAACAGCAATTGCATGGAATGATACTGCAAAGTCAGCAAATGGCACATTTTATAGTGGTTCAGTGCAAGTGTTTGCCTCCAACTTCATTGCTAAGAACATAAGCTTCATGAATTTAGCACCAATGCCAAGTCCTGGGGTTGAAGGAGCACAAGCAGTAGCTATTAGAATATCAGGAGATCAAGCTGAATTCAGGGGTTGTGGATTCTTTGGAGCCCAAGACACACTTCATGATGATAAGGGACGCCATTACTTCAAAGATTGCTATATCCAAGGCTCCATTGATTTCATTTTTGGTGATGCAAGGTCACTCTATGAGAATTGTCAACTAGTTTCTATAGCAAATCCAGTAACACCAGGGCAAAGGAGTATAAATGGTGCTATTACAGCTCATGGTAGAGTTTCAATGGATGAAAATACAGGTTTTGTATTTGTGAATTGTTCAATAGGAGGCAATGGAAGAATATGGCTAGGTCGTGCATGGAGGCCATTTTCTCGTGTTGTTTTTGCCTTCACAACAATGTCAGATATTATTGCTCCTGAAGGTTGGAATGATTTCAATGACCCTTCTAGGGATCAGACTATATTCTATGGAGAATATAATTGCTCAGGGCTTGGGGCTACTATGACTTTGAGGGCATCTTATGTACAAAGATTAAATGATACACAAGCTTTTCCATTCCTCAATGCAAGTTATATTGATGGTGACCAGTGGTTGGAGATTTACAAATAA 1197 0.381 MNLQSNFLSLLVPLISVFASFYLINPNPHFLNIFKDFSVTTLSSSFSYLTLPLTHNFGRNHHHRPHKKHDGSGDASTICDDFPQGIPPPSTNTTSYICVDRKGCCNFTTVQAAVNAVPDFSDKRTIIWINSGFYYEKVMVPKTKPNITFQGQGYPSTAIAWNDTAKSANGTFYSGSVQVFASNFIAKNISFMNLAPMPSPGVEGAQAVAIRISGDQAEFRGCGFFGAQDTLHDDKGRHYFKDCYIQGSIDFIFGDARSLYENCQLVSIANPVTPGQRSINGAITAHGRVSMDENTGFVFVNCSIGGNGRIWLGRAWRPFSRVVFAFTTMSDIIAPEGWNDFNDPSRDQTIFYGEYNCSGLGATMTLRASYVQRLNDTQAFPFLNASYIDGDQWLEIYK 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0320 398 Pfam Pectinesterase 97 391 IPR000070 GO:0030599|GO:0042545
Lal5g0320 398 ProSitePatterns Pectinesterase signature 2. 245 254 IPR033131 -
Lal5g0320 398 SUPERFAMILY Pectin lyase-like 95 396 IPR011050 -
Lal5g0320 398 Gene3D - 90 397 IPR012334 -
Lal5g0320 398 PANTHER PECTINESTERASE 8-RELATED 8 397 - -
Lal5g0320 398 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 8 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0320 Lal-Chr5 2878445 2882935 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0320 77 395 Carbohydrate Esterase AT1G05310 72.100 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0320 - - ahf:112696095 679.863