Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0318 ATGTACTCCTTCACTAATAGCTTTTCTCTTTCTTCCATGTCTAGCACTTTGTCCCCATATAAACAGCCCCCAAATAAGGAGAAGAAAAAACCAAGTGAGAAACATGGAACCAATCTGAAAACAAACAAGAAAATGGTAATAGACCAAGAATCTGCATCAAAGAACCAAGACAAAGGTAAAGGGATATCATTGGTTGAAGAATCTAAAGCAATCCATGATAAGAAGAAGAAAATCATGGAAGAAGATCTTAATGCAAATGAAGATCATTCAAAGTATCCAAAACTTTTTGGTGTCCTTCTCAAGCCTTTGAAGGGATCACAGAAAGGTCCTTACCCTTGTGCCTTGTGTGAGAAAAGCTTCCTCACTCCACAAGCATTAGGTGGCCACCAAAATGGCCATAAATGGGAGCAAAGTATCAAACAAAGAAAAGAAGGTATGAAATTATTTCAAGCAAAGAGTGGAAACTATAACTTCCCATCATCACTAACCCTACCTAGTTACCAAGGTGATGGAATGGATGGAACATTTCAGATTGCAGGGACACCTAGCTTCAATGATGGGACTATGCATTTTCCTCAGGAGAATATAGATAACAATACATTTCATCATTCACCAAAGACAAACACTGCTTACTGCACAAGCCCTGGTATGTTGGAGATTGGAAATAGTGCATTTCAATATCCACTGAGTTCAAGAAGGTTCAACTATGGGTTTGGGAACAATAACTATGGTATGGTGGACAAAGATTCTAGACTCAGTAGGCAAATGAATGAAGCTAGAGAGACTCAACTATCTGGAATATGA 804 0.3843 MYSFTNSFSLSSMSSTLSPYKQPPNKEKKKPSEKHGTNLKTNKKMVIDQESASKNQDKGKGISLVEESKAIHDKKKKIMEEDLNANEDHSKYPKLFGVLLKPLKGSQKGPYPCALCEKSFLTPQALGGHQNGHKWEQSIKQRKEGMKLFQAKSGNYNFPSSLTLPSYQGDGMDGTFQIAGTPSFNDGTMHFPQENIDNNTFHHSPKTNTAYCTSPGMLEIGNSAFQYPLSSRRFNYGFGNNNYGMVDKDSRLSRQMNEARETQLSGI 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0318 267 MobiDBLite consensus disorder prediction 23 41 - -
Lal5g0318 267 SUPERFAMILY beta-beta-alpha zinc fingers 108 138 IPR036236 -
Lal5g0318 267 ProSitePatterns Zinc finger C2H2 type domain signature. 113 133 IPR013087 -
Lal5g0318 267 MobiDBLite consensus disorder prediction 1 62 - -
Lal5g0318 267 ProSiteProfiles Zinc finger C2H2 type domain profile. 111 138 IPR013087 -
Lal5g0318 267 PANTHER ZINC FINGER PROTEIN JAGGED 75 175 IPR045320 GO:0003700
Lal5g0318 267 PANTHER OS02G0182300 PROTEIN 75 175 - -
Lal5g0318 267 MobiDBLite consensus disorder prediction 1 22 - -
Lal5g0318 267 Gene3D Classic Zinc Finger 85 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0318 Lal-Chr5 2852060 2852863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0318 111 148 C2H2 Transcription Factor Family AT5G01860 47.368 2.81e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0318 - - lang:109329350 385.956