Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0312 ATGGATTCAAATTCTCGTTTTCAACTTCAACAACAACAACCCAATTCTGGGTTACTTCGTTTTCGTTCTTCTCCAAGTTCTGTTCTTCATTCTGATGCTGCTTCTGCTTCATCTTCATCAATATCATCATCATCACCATTGACCCAAATGAATTCTCAGCAGGGATATATTACTGGGGTACCCTCTCGTTTTATGAGGCAAAACTCTATTACAAGTTCAGCTATGGATAGTTCTTATGGCCTTGTAGGGTCCATGGGAATGGAACATCATCAAAACAATAATAAAAGCTTTGGTTCTGATATTATAAGACAAAATAGTTTCCCAGCTGGAAATTTCTCCAACAATAAAATCTCCTTTCAGAATGGGTATGATACTATGAAAGGTGTTGGAAACTACGGTGTGATCGATGGCGGTGATAGTGAACTTAGTCTATCTATGAACAGATTGAAGAATCAAATTAGCTTCTCACCAAGAAGTCCTTCATTGGGAATTCTGTCACAGGTTTCTAAATTGGAGAATGAGGGCATCGGCGCAACTAGCCCGGATGATGGAAGAGACGAAGGTAACAACGGTGATGCACGATATTACGAACCTGGATTCGCATATGATTCTTGGAATGGAACTTCACAAATCTCAGAAAAACTCTGTGGCTTTAAAAGGGAGCGAGATAGTACTGATAAGTTATTTTTTGATGCTCAGAATGTAGAGCTTGGAAATCAAGTTCATACGCTATCGCATCACTTGAGTTTGCCGAAAACATCATCGGAGATGTTTGGTATGGAGAATTTGCTTCAGTTTCCAGATTCTGTTCCTTGTAAAATCAGAGCAAAGAGAGGTTGTGCTACTCATCCTAGAAGCATTGCTGAAAGAGTGAGAAGAACTCGGATCAGTGAACGAATGAGAAAATTGCAAGAGCTAGTTCCAAACATGGACAAGCAAACCAGCACAGCAGACATGTTGGACTTTGCTGTAGACTATATTAAAGATCTTCAGAAACAATTCAAGAGTCTGAGTGATAAAAGAGCTAAATGCAAATGTATAAGCATGCAGAAGCCAGACACAAATCAAAGCTAA 1074 0.3929 MDSNSRFQLQQQQPNSGLLRFRSSPSSVLHSDAASASSSSISSSSPLTQMNSQQGYITGVPSRFMRQNSITSSAMDSSYGLVGSMGMEHHQNNNKSFGSDIIRQNSFPAGNFSNNKISFQNGYDTMKGVGNYGVIDGGDSELSLSMNRLKNQISFSPRSPSLGILSQVSKLENEGIGATSPDDGRDEGNNGDARYYEPGFAYDSWNGTSQISEKLCGFKRERDSTDKLFFDAQNVELGNQVHTLSHHLSLPKTSSEMFGMENLLQFPDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTSTADMLDFAVDYIKDLQKQFKSLSDKRAKCKCISMQKPDTNQS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0312 357 MobiDBLite consensus disorder prediction 1 52 - -
Lal5g0312 357 Gene3D - 281 351 IPR036638 GO:0046983
Lal5g0312 357 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 10 350 - -
Lal5g0312 357 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 283 346 IPR036638 GO:0046983
Lal5g0312 357 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 280 330 IPR011598 GO:0046983
Lal5g0312 357 SMART finulus 286 336 IPR011598 GO:0046983
Lal5g0312 357 PANTHER TRANSCRIPTION FACTOR BHLH130 10 350 - -
Lal5g0312 357 Pfam Helix-loop-helix DNA-binding domain 285 331 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0312 Lal-Chr5 2760072 2763768 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0312 1 335 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 42.706 2.73e-73 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lal5g0312 HLH 7.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0312 - - gmx:100819605 424.476