Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0311 ATGCAACTACTACTACTACTACAACTTCATATTCTCTTCTTATTTTTCTTTCCTTCCACTTTCTCTCTAAACTCTGATGGTCTTTCCCTTCTAGCTCTCAAATCCGCTATCACCTTCGACCCAAACAGTGCTCTCAAAACCTGGTTCCAAACAGATCCAACCCCATGCAACTGGAACGGCGTCGTTTGTTTCCAAAACCGAGTCACCCAACTCGCTCTCCCTAACAACTCATTAACGGGTTACCTTCCTTCAGAACTCGGTCTTTTAACTTCCCTTAAACGTCTTTCTCTTCCTTACAATAATTTTTCAAACTCAATCCCTATTAATCTCTTCAACGCAACAAACCTTGTCGTTTTGGATCTCTCTCATAATTCTCTCTCTGGTTTCATTCCTTCGCAAATTCACTCTCTACGGTTACTCCGCCACGTGGACCTTTCATCAAATTCTCTCTCCGGTTCGCTACCGGAATCGTTATCGGAACTAATCGGACTCGTCGGAACGCTGAATTTATCGTTTAACCATTTCTCCGGCAGAGTTCCGGCATCACTGGGGAGGCTTCCGGTGGCGGTGAGTATTGATCTCCGGTATAATAACCTCACCGGAGAAATTCCTCAGGTTGGGTCGCTGCTGAATCAAGGCCCCACCGCGTTCTCCGGTAACCCTGGCCTCTGTGGGTTTCCTCTGCAGAACGCGTGCCCTGAAGCTGAGAAACCACCGGGCATTGTTACGAGTACGCAAGATGAGCCTCAAAATCCGAAAGCTGTGAATTCTGGTGGTGAAGGAGAGGTAGGAAATGGTGTTGGTGGTGGTCGTGGTGGTTCTGTTGCGGTTCCGGTGATCTCCGGAATATCGTTATTCGTTGCGGTTGTCTCGTTGTCTCTATGGATTTTCCGGCGGAGGTTGAACGCGGAGGAGGGTAATTTGGGGAAAAGGAAGTTGGAAATTGGGGTTGGTAATGAATTAGGGGGAGAAGGGCAAAATGGTAAATTTGTTGTGGTTGATGAAGGGTTTGGGTTGGAGTTGGAGGATTTGTTGAGAGCATCTGCTTATGTTGTTGGGAAGAGCAGGAGTGGGATTGTGTATAAGGTAGTCGGTGCCGGAAAAGGGTCGGGAGGGGCTGCATCGGCGACGGTGGTGGCCGTGCGGCGACTAAGCGAAGGCGATGATGCCACGTGGCGGTTCAAGGAGTTTGAGTCTGAGGTAGAAGCAATTGCAAGGGTTCGTCACCCCAATGTTGTTCCTTTGAGAGCTTATTACTTTGCACATGATGAGAAATTGATTATCACTGATTTCATCAGAAATGGTAGTTTGTACACTGCATTACATGGTGGGCCTTCCAATTCATTGCAACCATTATCATGGGCAGCGAGGTTAAAAATTGCTCAAGATGCAGCAAGGGGCCTGACGTACATACACGAGTTCAGTGGTCGGAAATATGTCCATGGCAACCTAAAATCAACAAAAATCTTACTAGATGATGATCTCCGTCCTTACATATCAGGTTTTGGACTAACTCGTCTTAGTTTGGGTACCACGAAGTGTTCCACATTGGCACCAAAGCGGCAGAACTCAAACCAATCTTCCTTATCCTCTACTATGGGTTCAATGGCTGCCTCTAACTACTACTTGGCACCTGAGGTGCGCATGGCTGGTGGCAAATTCACACAAAAATGTGATGTGTATTCCTTTGGTCTAGTGCTGTTAGAACTTTTGACCGGCAAGCAGCATAATTTTGGACTAGAAAATGATGACATGGTGCTAGAGTGTTTTGTAAGGAAAGCATTCAAGGATGAGCAGCCATTGTCTGAGATTATAGACCCAGCACTTCTGCCTGAGGTTTATGCTAAAAAACAAGTTGTTGCTGCATTCCATGTTGCTCTGAACTGCACAGAACTTGATCCAGAATTGCGTCCTAGAATGAGAACGGTGTCCGAGAGCCTTGATCGCATCAAAATACAGTGA 1962 0.4659 MQLLLLLQLHILFLFFFPSTFSLNSDGLSLLALKSAITFDPNSALKTWFQTDPTPCNWNGVVCFQNRVTQLALPNNSLTGYLPSELGLLTSLKRLSLPYNNFSNSIPINLFNATNLVVLDLSHNSLSGFIPSQIHSLRLLRHVDLSSNSLSGSLPESLSELIGLVGTLNLSFNHFSGRVPASLGRLPVAVSIDLRYNNLTGEIPQVGSLLNQGPTAFSGNPGLCGFPLQNACPEAEKPPGIVTSTQDEPQNPKAVNSGGEGEVGNGVGGGRGGSVAVPVISGISLFVAVVSLSLWIFRRRLNAEEGNLGKRKLEIGVGNELGGEGQNGKFVVVDEGFGLELEDLLRASAYVVGKSRSGIVYKVVGAGKGSGGAASATVVAVRRLSEGDDATWRFKEFESEVEAIARVRHPNVVPLRAYYFAHDEKLIITDFIRNGSLYTALHGGPSNSLQPLSWAARLKIAQDAARGLTYIHEFSGRKYVHGNLKSTKILLDDDLRPYISGFGLTRLSLGTTKCSTLAPKRQNSNQSSLSSTMGSMAASNYYLAPEVRMAGGKFTQKCDVYSFGLVLLELLTGKQHNFGLENDDMVLECFVRKAFKDEQPLSEIIDPALLPEVYAKKQVVAAFHVALNCTELDPELRPRMRTVSESLDRIKIQ 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0311 653 Gene3D Phosphorylase Kinase; domain 1 339 431 - -
Lal5g0311 653 ProSiteProfiles Protein kinase domain profile. 346 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g0311 653 MobiDBLite consensus disorder prediction 242 266 - -
Lal5g0311 653 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 7 653 - -
Lal5g0311 653 Pfam Protein tyrosine and serine/threonine kinase 353 646 IPR001245 GO:0004672|GO:0006468
Lal5g0311 653 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 7 653 - -
Lal5g0311 653 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Lal5g0311 653 Gene3D Ribonuclease Inhibitor 22 165 IPR032675 -
Lal5g0311 653 SUPERFAMILY L domain-like 26 229 - -
Lal5g0311 653 SUPERFAMILY Protein kinase-like (PK-like) 351 647 IPR011009 -
Lal5g0311 653 Gene3D Ribonuclease Inhibitor 166 234 IPR032675 -
Lal5g0311 653 Pfam Leucine rich repeat 91 150 IPR001611 GO:0005515
Lal5g0311 653 Gene3D Transferase(Phosphotransferase) domain 1 432 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0311 Lal-Chr5 2742162 2746208 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0311 23 651 Receptor kinase-like Gene Family AT3G57830 58.879 0.0 713
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal5g0311 PK_Tyr_Ser-Thr 1.8e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0311 - - gmx:100796011 876.315