Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0280 ATGGAGGTTGAGATTGGAAACTCATTGGAATCATTGCAGAACTTTTTAGCTTCGCAAAGAGAACTCTTCCATACTCAGATCGATCAGTTTCAACAAATTGTCGTCACACAATGCAATCTCACTGGTGTTAATCCCCTATCTCAAGAAATGGCAGCTGGTGCTTTATCAATAAAAATAGGAAAAAGACCCAGGGATTTAATAAACCCAAAGGCTATAAATTACATGCAATCGATTTTTTCTATTAAAGATGTTATTAGCAAGAAAGAATCTCGTGAGATCAGTGCTTTATTAGGTGTCACGGTGACACAGGTGCGTGACTTTTTCAATAGTCAACGTTCAAGAGTGAGGAGGTTAGTTCAGTTGTCAAGGGAGAGGGCGTTAATATCTAATTCTTGTGAAGAATCTCAAGGTGGACAGATAGACTCTGATCCTATGAGACCAATAAATCCTGTCCCCTTAAACTCTGCTGGCCCCGCCAATGCTGAGGAAGCATCTTGTTCAACACAAGAAGCAACCTTTTCTGACCTAGATGACTTTGATAAACAATTTGTTGATAACATTTTTAGTCTAATGTGGAAAGAGGAAACATTTTCTGGGCAGGAGAAATTGATGGAGTTTTTGACCAGAGGTGGTGTTATCATTTTAGCAACTTGGTTGAGTACAGCAGCTGTTGAAGAGCAAACAAGTGTCCTTCTTCTTATCTTAAAGGCAAATCTGGATCCGATGGTTCTTTGTCATTTGCCTCTACATAAAGCTCTTCCTACACAAATATCAGCTATGTTGCAGAGTGTTAATAGACTACGGTTCTATAGAACTTCAGACATTTCGAACAGAGCAAGGATTTTGTTAGCAAAGTGGAGCAAATTATCAGCAAGGAACCAAGCAATAAAGAAAATTAACAGTGTTAATTCTGGTAGTAATGGTAAAAGAGAGACAATGCTTTCTCACAGTATTGGTCAAATTATGGGATCTGAATCATGGCATTCAAATATTGATGTTCCCGAAGATATTCTTGCTCTCTCCAATGAATGTTCAAATAATCCCAGGAAAGTGGAGGCACCACAAGCTTTAAAATTGTTGCCACCTAGCTCGGATGATTCTAATAAGAAGCACGTCCTTGGTGTATCTTCATCACAATATCGAGAGCGCAGAAAAGTGCAATTGGTGGAACAGCCAGGCCAAAAAACAGCAAGCAGAAGCCCACAGAAAACAAGAGCACAGCCTGTAAGTCAAGGCCGCCCCATGTCTGCTGATGATATCCAGAAAGCAAAAATGCGTGCCTTATTTATGCAGAGTAAGTATGGGAAAACTGGTCCTTCAAAAGAAAGTAAAGGAGCACAGGTTAATGGTCTGAATAAACCTCAGACAAATCAGGCTAGTATTTCAACTTGCTCTTCTAAAGTTCCTATTCCACCCAAAATTGAAGAAAAGAAATCTCCACTGCTTCCCTCTAAAACCACTAATAGGCTGGAAGCTTCCGATTCTAAACTGAAAATGGATTTGAAGGAACCTCTTTGGGAGAAGTGCAAGAGGGTGCAAATCCCATGGACAACACCAGCAGAGAGTGTGAGCATCGATGCAATAGTAAAGTTGTTAGTTAGTGGCCAAGATGTCACAGAAGTGATACTTGATAATAGCTGGAAAGTTGGTGCTGGTCAAAATAGCAAAGAGGTTGAAGTTGAGAAAAACAGAAACCTCAGGGATAAGGAAACTATCTACAAATCTATCCAAGAAATACCATCAAATCCAAATGAGCCATGGGACCTTGAAATGGACTATGATGACACATTGACACCAGAGATTCCTATTGAACAGTTACCAGATTGTGATGGTGATGATGATGATGATGGTGCGGAAATGGTTGACCCTAATGAAGTTGCAGCTCATGCCATTCAAGTTCAAGCGGTGGCCACTACATCTTCAAATAGTAATAATAATGCAGTTAATGCTGAACCTGATCTAGAACTTCTTGCTGTGCTTCTAAAAAATCCAGAGTTGGTATTTGCCTTAACTTCTGGACAAGGTGGTAGCATAACAAATGAGGAAACAATGAAGCTTCTTGATATGATCAAGAGAGGTGGGTTGAACTTGGGTTTAAGTGAAAATAATGCAAATGCAAGTACAAATGGGAATCATGGCATGAGTTCAAAGGCACCAGAAACTGTGGAAGTTTCTCTGCCATCCCCAACTCCTTCAAGTGATTCAAGAACGGTGCGTGATTTGAGTTCATATACTGCAACTATTTGTCAAAGGATACTGCACAGTTTTCTTGCATGCCATAGTGGATGGAGCACAAAAGCATCAACAAAGAATCCATTTTCACGGCAAAGTTTAGCAACTGATAGAATTATCAATAGCTCCCCAACTGTGGCAACTACCAACTTATTATCTCAGTTTCCGGCTTCGGGCACCACCGTAAGACAACATCCGCCGACCACCACAGCAGTTTCTCGATATTCACTGCCTCAGGCAAATAATATTGTTCCTCATTCTCTTTCCTCTGTGCATGTACAAACACCCTCATCATTGGATATAGGTTTAAGAACCATGAGGATGAATATAATCACTGCAAATGCATCATCTTCTGTTAGCATACATAGTGCACATTCACCACTAGAAATGCAGGCTTATGGCACTACTAGTAATGTAAAACCAGTACCTAAATTAAGTTCCCAAGAGAGTGTGTGTAATTCATTCCAACAATACCCCATTTTGACCTCACAAACACCATCATCACTTTCATCCACACAGCAACAAAGACATACTACACATTTGATGCAACAACAACAACAACAACAAAAGACCCATTTTTCTGAACCTTCATATCATAGTAACCCATTACATTCTTATCCACCACAAATTGAAAAACCAGGTCCAGTGTCAAATGTGTGGAGAGTTATGCATCAGGATCAGCCACCCAGTTATGATTATTCTGAAAGAAACCAAAACAATTATAACAACACATTGGTTGGGGGATCCATGCAATCTGGTTCTTCATGGGGTAGAAATAATCATGGTACTAGGGAAGGATATGAAACATGGAGCCCAGAGAATAGTCCAACTAGAAATCCTAGGAGTGTTGTAGGTAGAAATTTGAATGAGTCCAGAATGAATAATAATCATGCAAGAAATCAATGGTCAAGGCAACAATGGGGTACTTCTGAACATTGGGACCCTGCTAGACATGGGAACAAAAAGTGGCATGATCAGAGACAATGA 3219 0.4001 MEVEIGNSLESLQNFLASQRELFHTQIDQFQQIVVTQCNLTGVNPLSQEMAAGALSIKIGKRPRDLINPKAINYMQSIFSIKDVISKKESREISALLGVTVTQVRDFFNSQRSRVRRLVQLSRERALISNSCEESQGGQIDSDPMRPINPVPLNSAGPANAEEASCSTQEATFSDLDDFDKQFVDNIFSLMWKEETFSGQEKLMEFLTRGGVIILATWLSTAAVEEQTSVLLLILKANLDPMVLCHLPLHKALPTQISAMLQSVNRLRFYRTSDISNRARILLAKWSKLSARNQAIKKINSVNSGSNGKRETMLSHSIGQIMGSESWHSNIDVPEDILALSNECSNNPRKVEAPQALKLLPPSSDDSNKKHVLGVSSSQYRERRKVQLVEQPGQKTASRSPQKTRAQPVSQGRPMSADDIQKAKMRALFMQSKYGKTGPSKESKGAQVNGLNKPQTNQASISTCSSKVPIPPKIEEKKSPLLPSKTTNRLEASDSKLKMDLKEPLWEKCKRVQIPWTTPAESVSIDAIVKLLVSGQDVTEVILDNSWKVGAGQNSKEVEVEKNRNLRDKETIYKSIQEIPSNPNEPWDLEMDYDDTLTPEIPIEQLPDCDGDDDDDGAEMVDPNEVAAHAIQVQAVATTSSNSNNNAVNAEPDLELLAVLLKNPELVFALTSGQGGSITNEETMKLLDMIKRGGLNLGLSENNANASTNGNHGMSSKAPETVEVSLPSPTPSSDSRTVRDLSSYTATICQRILHSFLACHSGWSTKASTKNPFSRQSLATDRIINSSPTVATTNLLSQFPASGTTVRQHPPTTTAVSRYSLPQANNIVPHSLSSVHVQTPSSLDIGLRTMRMNIITANASSSVSIHSAHSPLEMQAYGTTSNVKPVPKLSSQESVCNSFQQYPILTSQTPSSLSSTQQQRHTTHLMQQQQQQQKTHFSEPSYHSNPLHSYPPQIEKPGPVSNVWRVMHQDQPPSYDYSERNQNNYNNTLVGGSMQSGSSWGRNNHGTREGYETWSPENSPTRNPRSVVGRNLNESRMNNNHARNQWSRQQWGTSEHWDPARHGNKKWHDQRQ 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0280 1072 MobiDBLite consensus disorder prediction 1058 1072 - -
Lal5g0280 1072 MobiDBLite consensus disorder prediction 359 418 - -
Lal5g0280 1072 MobiDBLite consensus disorder prediction 701 738 - -
Lal5g0280 1072 MobiDBLite consensus disorder prediction 994 1072 - -
Lal5g0280 1072 ProSiteProfiles 'Homeobox' domain profile. 58 118 IPR001356 GO:0003677
Lal5g0280 1072 MobiDBLite consensus disorder prediction 908 959 - -
Lal5g0280 1072 SMART HOX_1 60 122 IPR001356 GO:0003677
Lal5g0280 1072 MobiDBLite consensus disorder prediction 994 1054 - -
Lal5g0280 1072 SUPERFAMILY Homeodomain-like 61 121 IPR009057 -
Lal5g0280 1072 MobiDBLite consensus disorder prediction 434 480 - -
Lal5g0280 1072 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 2 1071 - -
Lal5g0280 1072 MobiDBLite consensus disorder prediction 436 467 - -
Lal5g0280 1072 MobiDBLite consensus disorder prediction 391 411 - -
Lal5g0280 1072 Gene3D - 60 117 - -
Lal5g0280 1072 PANTHER HOMEOBOX PROTEIN LUMINIDEPENDENS 2 1071 - -
Lal5g0280 1072 CDD homeodomain 61 117 IPR001356 GO:0003677
Lal5g0280 1072 MobiDBLite consensus disorder prediction 908 948 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0280 Lal-Chr5 2491654 2501798 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0280 2 776 Homeobox Transcription Factor Family AT4G02560 45.721 0.0 609
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lal5g0280 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0280 - - gmx:100780237 1229.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0280 5 2491654 2501798 Lal5g0280 5 2491654 2501798 ECH