Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0277 ATGAAAAGCAAAAGGCAGAAAATTGTGAAGAAGAGAATGAACAAGATGAAGGGAACTCTTACTACTACCAAACAATTTCAGCTTCCACTTAATCAATTCTCTTTTTTACCCCTTCACCCCAACACTTCTTCTTCTTCTTCTTCAACTACCCCTTCCACATTCCAGAACCTTCTAGATCCCCAATCTCACCACCACGCTTCTTCTTCTTCCTCCTCTCACCTCACAAACGCCACCGCCGCCGCCGTCAATCTTAATATCGCCACCGTGGATGACAACAACAACAACAACATAGACTTCATTCTCAGTCAGGATTTCTTTTGTACTCCAGATTACATAACACCTGATAATCAGAACAATTTCAATTGTTTCGATTTCAATAAGGAGAATACACCTTGCCCTAAATCACCGGAGAAGATAAACACTTCGAAAAGCAAGAGATGTCGATTGGATGCTATCTCAGCAAACCCATTCAGCCCTATGTTTTCAAGTGACCATCAACAAGTAGCAGAACTTGGAATGGACTATGCTGCAGAGGAATTAGCTGTTGAGAAAATAATAGTGGATGATAAACCAAAGGCTCCAAATTATGTCTCACATTCTGCAGTTGCATTGCGCTGCAGGGTTATGCCTCCTCCTTGCATTAAGAATCCATATTTGAAAGAAGTTTCTGAAAAGGAGACAGATCCCTTTGGAAACCAAAGATCAAAATTTTCAGGTCTCTTCCCTCCAATTATTGGTGGTGATGGTCTTTCACGCTACTACACTGACTTTCATGAGATTGAGCAAATTGGTAGAGGGAACTTTAGTAGTGTTTTCAAAGTATTAAAGCGACTAGATGGCTGCTTGTATGCTGTTAAACACATCTCCAGACAATTACGGCTGGAAACAGAAAGGGGGAAAGCTTTAATGGAAGTTCAATCTCTGGCGGCATTAGGGTCCAATGAGAACATTGTGGGATATTATTCTTCATGGTTCGAAAATGAACAACTTTACATTCAGATGGAGTTATGTGATCACAGCTTATCCATCAAAAAATGCTCTGCATTATTTACAGAAGGACAAGCTCTAGAAGCTTTATATCAGGTAGCCAATGCACTGCGATTTGTACACGAGAAGGGAATAGCTCATCTAGATGTTAAACCTGATAACATTTATGTCAAAAATGGTGTGTATAAGCTTGGCGATTTCGGATGTGCAACTCTTCTTGATAATAGCCTTCCAATTGAGGAGGGCGATGCTCGTTATATGCCACAAGAAATCCTTAATGAGAATTACGATCACCTTGACAAGGTTGATATCTTCTCCTTGGGAGCTTCTATTTATGAGCTCATTCGCAGATTTCCGTTACCAGATTCAGGATCTCATTTTTTAAATCTTAAAGAGGGCAAGTTGCCACTTCTGCCTGGTCATTCATTGCAGTTTCAAAACTTGCTCAAGGTCATGATGGACCCAGATCCTGTAAAGCGACCTTCTGCTAAAGAGTTGGTAGAGAATCCAATTTTTGACAAGGTCCTAAAAACAACAAAAAATTAA 1533 0.4018 MKSKRQKIVKKRMNKMKGTLTTTKQFQLPLNQFSFLPLHPNTSSSSSSTTPSTFQNLLDPQSHHHASSSSSSHLTNATAAAVNLNIATVDDNNNNNIDFILSQDFFCTPDYITPDNQNNFNCFDFNKENTPCPKSPEKINTSKSKRCRLDAISANPFSPMFSSDHQQVAELGMDYAAEELAVEKIIVDDKPKAPNYVSHSAVALRCRVMPPPCIKNPYLKEVSEKETDPFGNQRSKFSGLFPPIIGGDGLSRYYTDFHEIEQIGRGNFSSVFKVLKRLDGCLYAVKHISRQLRLETERGKALMEVQSLAALGSNENIVGYYSSWFENEQLYIQMELCDHSLSIKKCSALFTEGQALEALYQVANALRFVHEKGIAHLDVKPDNIYVKNGVYKLGDFGCATLLDNSLPIEEGDARYMPQEILNENYDHLDKVDIFSLGASIYELIRRFPLPDSGSHFLNLKEGKLPLLPGHSLQFQNLLKVMMDPDPVKRPSAKELVENPIFDKVLKTTKN 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0277 510 PANTHER BNAA08G27310D PROTEIN 428 505 - -
Lal5g0277 510 PANTHER BNAA08G27310D PROTEIN 79 415 - -
Lal5g0277 510 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 79 415 - -
Lal5g0277 510 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 428 505 - -
Lal5g0277 510 ProSitePatterns Protein kinases ATP-binding region signature. 263 286 IPR017441 GO:0005524
Lal5g0277 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 374 386 IPR008271 GO:0004672|GO:0006468
Lal5g0277 510 ProSiteProfiles Protein kinase domain profile. 257 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g0277 510 MobiDBLite consensus disorder prediction 1 21 - -
Lal5g0277 510 Gene3D Phosphorylase Kinase; domain 1 248 335 - -
Lal5g0277 510 SUPERFAMILY Protein kinase-like (PK-like) 250 503 IPR011009 -
Lal5g0277 510 Gene3D Transferase(Phosphotransferase) domain 1 336 506 - -
Lal5g0277 510 MobiDBLite consensus disorder prediction 39 72 - -
Lal5g0277 510 SMART serkin_6 257 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g0277 510 Pfam Protein kinase domain 257 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0277 Lal-Chr5 2467468 2471918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0277 2 504 Core Cell Cycle Gene Families AT1G02970 58.039 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Lal5g0277 Pkinase 4.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0277 K06632 - gmx:547742 723.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0277 5 2467468 2471918 Lal5g0277 5 2467468 2471918 ECH