Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0261 ATGATCATAATAGCACGATTCGTGTTACTAGCATTGCTTTTTTCATCCCTAGCAAATACAAGCCAAATGGTATTTGCAAAAGGGTTTGATAATGTTAAAGAAGCTTGTAGGGTAACAAGGTATCAAAACCTTTGCATACACTCTTTATCACAATTCTCTAACACTGCAGGAAGAAGCCCTAGTAAATGGGCACGTGCAAGTGTTTCAGTAACAATAGGAGAAGTCAAAAATGTTCAAAAATATCTTCAAAATTTGAACAGAAACAAGATTATTATGAGAGGAAGAAATAGAATTGCACTTTCAGATTGTATTGAATCTTTTGCAGATACCATTGATGAACTTCACAAATCACTTAATGTGCTTAGGAGGCTAAGTAAAAGCATATTTAGTACCCAAATGGGGGATTTAAATACATGGATCAGTGCAGCACTTACTAATGAAGAAACTTGCATTGATGGATTTGAAGGACAAAGTAAGAACCAAATCAAAATGCTGCGAAATAGGGTTCAGAATGTGTCTTGCATAACAAGTAATGCTCTTGCTCTTGTTAATAAACTTGCTACTACTGGTATTGGAAGCATCACAGATCCATAG 594 0.3519 MIIIARFVLLALLFSSLANTSQMVFAKGFDNVKEACRVTRYQNLCIHSLSQFSNTAGRSPSKWARASVSVTIGEVKNVQKYLQNLNRNKIIMRGRNRIALSDCIESFADTIDELHKSLNVLRRLSKSIFSTQMGDLNTWISAALTNEETCIDGFEGQSKNQIKMLRNRVQNVSCITSNALALVNKLATTGIGSITDP 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0261 197 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 22 181 - -
Lal5g0261 197 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 186 IPR006501 GO:0004857
Lal5g0261 197 Pfam Plant invertase/pectin methylesterase inhibitor 31 182 IPR006501 GO:0004857
Lal5g0261 197 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 186 IPR035513 -
Lal5g0261 197 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 188 IPR035513 -
Lal5g0261 197 SMART PMEI_2 27 182 IPR006501 GO:0004857
Lal5g0261 197 PANTHER PECTINESTERASE INHIBITOR-LIKE 22 181 - -
Lal5g0261 197 CDD PMEI-like_3 35 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0261 Lal-Chr5 2291925 2292518 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0261 15 191 Carbohydrate Esterase AT3G14310 30.939 2.01e-20 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0261 - - gmx:100791264 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0261 5 2291925 2292518 Lal5g0261 5 2291925 2292518 ECH