Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0256 CAAAATTCCTTGATCCAAAAATCAATGGCTCTCAAGAATACACTCATTGCTACACTTTGTGTTTTGTTTTTACTTTCCATCTTTGCATCATTATCCATAGCTGATAACTATGCAAAACCAATTCCACCAGAAACTATTTGCCAATCCACAACACACCCTTCTTATTGCAAAACCATGCTTTCTAATCAAAATGGCACCATATTTGACTATGGTCGCATTTCTGTTAGAAAATCATTGTCCCATTCTCTTAAGTTCTTTAACTTATTGGATACATATCTTCATGATAAGTCATCTTTGTCAAAACCTACAATTAATGCTCTTGAAGATTGTAGATTCCTTGCTGAACTAAATTTTGATTATTTATCAAACACATATGATAATGTTGATAAAGGTAATGATAATAATCTTTCAAACTCTCAAACAGAAGATCTACAAACCCTACTTAGTGCAGTTTTGACAAATCAACAAACTTGTTTAGATGGCTTAACAAACATAGATTCTGATAAAAGATTGAAGAATCATCTTTCTTCTTCACTATCTGATGATACCAAGCTTCATAGTGTGTCTCTTTCTTTGTTCATGAAGGGTTGGGTTCCAAATAAGAAAACACCAACAACAACATGGGAAAACAATAATGGAAGACATTTAGGTTTTCAAAATGGTCGTTTACCATTGAAGATGTCAAACCAAGTACGTGCCATTTATGGTAATGCTAGAGGCCATGGAAGAAAGTTACTTCAAACAATGGATGATAGTGTAGAAGTGAGTGACATTGTAGTTGTTAGTGGAGATGGAAGTGGAAACTTCACTACAATAAATGATGCTGTAGAAGTTGCACCAAATAACACAGATGTTGGTAATGGATACTTTGTTATTTTCATTACTGAAGGTGTGTATAAAGAATATGTATCTATCCCAAAGAAGAAGAAGAATTTGATGCTTATTGGAGAGGGAATCAATCGTACAATTATCACTGGTGATCACAATGTCGTTGATGGTTTTACAACATTCAACTCGGCAACATTTGCTGTTGTAGCACAAGGGTTTGTTGCAGTTAACATAACATTTCGTAACACTGCTGGACCAAGTAAGCACCAAGCAGTAGCAGTGAGAAATGGAGCAGATTTATCAACCTTCTATAGTTGCAGTTTTGAAGGATATCAAGACACTTTATATACTCATTCTCTAAGACAATTCTATAGTGAATGTGATATATATGGCACAGTAGATTTCATATTTGGAAATGCTGCTGTTGTTTTTCAAAGTTGTAACCTAATTCCTCGCTTACCCATTAATGGACAATTCAATGCTATCACTGCACAAGGTCGTACAGATCCAAATCAAAACACAGGAACTTCAATACATAATGCTATTATTAAAGCTTCTAATGATTTGGCTCCAATGGTAAGTACTGTGAAAACATACCTTGGGAGGCCATGGAAGGAGTATTCAAGAACAGTTTATTTGCAATCATTTATGGATAATTTAATAGATCCTAGTGGGTGGCATGAATGGAATGGAGATTTTGCATTAAGTACTTTGTTCTATGGAGAGTATAATAACACAGGACCTGGTTCTAACACTACAAATAGAGTGAATTGGGAGGGTTATCATGTTATGAACACTAATGATGCAGATAATTTTACTGTATCTAAGTTTTTGGATGGGGATGCTTGGTTACCTCAAACTGGGGTACCATTCTTCAGTGAATTGATATAG 1719 0.3479 QNSLIQKSMALKNTLIATLCVLFLLSIFASLSIADNYAKPIPPETICQSTTHPSYCKTMLSNQNGTIFDYGRISVRKSLSHSLKFFNLLDTYLHDKSSLSKPTINALEDCRFLAELNFDYLSNTYDNVDKGNDNNLSNSQTEDLQTLLSAVLTNQQTCLDGLTNIDSDKRLKNHLSSSLSDDTKLHSVSLSLFMKGWVPNKKTPTTTWENNNGRHLGFQNGRLPLKMSNQVRAIYGNARGHGRKLLQTMDDSVEVSDIVVVSGDGSGNFTTINDAVEVAPNNTDVGNGYFVIFITEGVYKEYVSIPKKKKNLMLIGEGINRTIITGDHNVVDGFTTFNSATFAVVAQGFVAVNITFRNTAGPSKHQAVAVRNGADLSTFYSCSFEGYQDTLYTHSLRQFYSECDIYGTVDFIFGNAAVVFQSCNLIPRLPINGQFNAITAQGRTDPNQNTGTSIHNAIIKASNDLAPMVSTVKTYLGRPWKEYSRTVYLQSFMDNLIDPSGWHEWNGDFALSTLFYGEYNNTGPGSNTTNRVNWEGYHVMNTNDADNFTVSKFLDGDAWLPQTGVPFFSELI 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0256 572 Gene3D Invertase/pectin methylesterase inhibitor family protein 44 195 IPR035513 -
Lal5g0256 572 Gene3D - 252 571 IPR012334 -
Lal5g0256 572 Pfam Plant invertase/pectin methylesterase inhibitor 44 191 IPR006501 GO:0004857
Lal5g0256 572 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 193 IPR035513 -
Lal5g0256 572 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 24 570 - -
Lal5g0256 572 ProSitePatterns Pectinesterase signature 2. 405 414 IPR033131 -
Lal5g0256 572 CDD PMEI-like_3 45 197 - -
Lal5g0256 572 SUPERFAMILY Pectin lyase-like 256 568 IPR011050 -
Lal5g0256 572 Pfam Pectinesterase 259 557 IPR000070 GO:0030599|GO:0042545
Lal5g0256 572 PANTHER PECTINESTERASE 24 570 - -
Lal5g0256 572 SMART PMEI_2 38 192 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0256 Lal-Chr5 2252859 2255374 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0256 22 572 Carbohydrate Esterase AT4G02330 57.469 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0256 K01051 - gmx:100786124 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0256 5 2252859 2255374 Lal5g0256 5 2252859 2255374 ECH