Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0250 CAACCTAATATATGCGCTATTACAGAACTGACAAATATAACAGCGTGGACTACAACTGGCGCGCTGTGTTATGATAAATATATAACAGCGTCACCCATACGTAGCGCTGTAATATTTTCCAATGTATTCGACTGTTTCCTTTTTCTAGAAACAAGCTCTCTACTTGTATATATATCGATCTTTTTTCGATTGGAAGGTTCATGCTTATTTTTTATTCGATTGTTCCTTTTATTTTCAGAAAATTTAATTGGAAAGGGTGGATTTGCTGAGGTTTATAAAGGTTGCTTACAAAATGGAGAACTAGTAGCTGTGAAGAGAATGATGAGAGGTACAAAAAATGAAAGGACATCAAACTTTCTATCTGAGTTAGGAATTATTGCTCATATCAACCATCCTAATATTGCTAAGCTTATTGGGTGTGGTGGAGAAGGAGAAATGGTCCTTGTTTTCCAACTATCTCCAATGGGAAGTTTGGGATCTCTTCTTCATGGTCCAAATAAAAACATATTAGATTGGACAAAAAGGTACAAAATTGCACTGGGGATAGCAGATGGACTTGTATATCTCCATGAGGAATGTGATAGAAGAATCATTCACAGAGACATCAAATGTGACAACATTCTTCTCACAAAAGATTTTGAGCCACAGTCTTTGATGGGTCAGAAATTTCTCCAGATTTGTGATTTTGGCCTTGCAAAATGGTTACCAGAACAAAGTCCACACCTATCTCCCCATGACATATCAAAATTTGAAGGCACATTTGGGTATTTTGCTCCTGAATACATAATGCAAGGCATAGTGAATGAAAAAACTGATGTTTATTCCTATGGGATACTACTTTTGGAGATTATAACCGGTCGAAGGGCTCTTGATCATTTGCAGCAAAGTATCGTCCTATGGGCAAGGCCATTGCTTGATGCTAATAATCTAAGGGAACTTGTTGATCCTTCCCTTGGTGATGATTATGACTTAGAAGAGATGGAGTGTGTTGTTTTGACTGCATCTTTGTGTGTTGAGCAATCTCCTTTCTTACGCCCTAGAATGAGTGAGGTAACTACACAACCAAAATATATAGTTGCATTATAA 1086 0.3711 QPNICAITELTNITAWTTTGALCYDKYITASPIRSAVIFSNVFDCFLFLETSSLLVYISIFFRLEGSCLFFIRLFLLFSENLIGKGGFAEVYKGCLQNGELVAVKRMMRGTKNERTSNFLSELGIIAHINHPNIAKLIGCGGEGEMVLVFQLSPMGSLGSLLHGPNKNILDWTKRYKIALGIADGLVYLHEECDRRIIHRDIKCDNILLTKDFEPQSLMGQKFLQICDFGLAKWLPEQSPHLSPHDISKFEGTFGYFAPEYIMQGIVNEKTDVYSYGILLLEIITGRRALDHLQQSIVLWARPLLDANNLRELVDPSLGDDYDLEEMECVVLTASLCVEQSPFLRPRMSEVTTQPKYIVAL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0250 361 Gene3D Phosphorylase Kinase; domain 1 77 152 - -
Lal5g0250 361 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 79 352 - -
Lal5g0250 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Lal5g0250 361 PANTHER OS08G0249100 PROTEIN 79 352 - -
Lal5g0250 361 ProSitePatterns Protein kinases ATP-binding region signature. 83 105 IPR017441 GO:0005524
Lal5g0250 361 SUPERFAMILY Protein kinase-like (PK-like) 79 355 IPR011009 -
Lal5g0250 361 Gene3D Transferase(Phosphotransferase) domain 1 154 360 - -
Lal5g0250 361 Pfam Protein kinase domain 81 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g0250 361 SMART serkin_6 77 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g0250 361 ProSiteProfiles Protein kinase domain profile. 77 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0250 Lal-Chr5 2191761 2194635 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0250 79 351 Receptor kinase-like Gene Family AT1G53420 43.972 6.20e-66 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lal5g0250 Pkinase 2.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0250 - - lang:109330341 515.768