Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0248 ATGCCGGTCTCCGATTCTCATTCCGCCGCCCCTAATTTCATTCCCAAAGGTCTCCTTTTTAATGCCGCCGCCGGTGCTTCCGCCGGAGTTATTGCTGCTACATTTGTGTGTCCTTTAGATGTCATCAAAACTAGGTTACAGGTTAATGGGGCACCCCAACTTCCTAATGCAAGAGTTAAAGTTGGCAGTGTAATAGTTGGTAGTTTGGAACAAATATTTCGCAAAGAGGGATTACGTGGCATGTACCGTGGGCTTGCTCCTACTGTGCTTGCTTTACTTCCAAACTGGGCGGTTTATTTTACTATGTATGAGCATCTCAAGAGCCTTCTTCATTCTGATGATGGAAGCCATCATCTTCCGGTTGGAGCTAATATGATAGCTGCTTCTGGTGCTGGAGCTGCGACTACCATGTTTACAAATCCACTTTGGGTTGTCAAGACTAGACTCCAAAATGTTGATTTGACTTTGTTGGATCTCTGTATGGCATCCATGCAAGATGAGAAAACCTCTATCAGATTGTTATTCATTTATGACACAGGGACCCAGGGAATGAGAGCTGGTGTTGTGCCATATAGTAGCACACTATCTGCATTGAGGAGAATTGCACATGAGGAGGGCATTCGGGGGCTATACAGTGGCCTTGTACCTGCTTTGGCGGGTATCAGTCATGTTGCGATCCAGTTTCCAACATACGAGACAATAAAATTTTATTTGGCAAATCATGATGAATCAGCAGTGGATAAACTTGGTGCACGCGATGTTGCAATTGCCTCATCAGTCTCTAAAATTTTTGCATCCACTTTAACATATCCTCATGAGGTTGTACGTTCCAGACTGCAAGAACAAGGGCACCACTCAGAGAAAAGGTACCTGGGTGTGATTGACTGTGTTAGAAAGGTTTTTCAACAAGAAGGCGTATCGGGTTTTTACCGAGGTTGTGCCACGAACCTTTTGAGAACAACACCAGCTGCCGTTATCACATTCACCAGCTTTGAAATGATACACCGTTTTCTGGTATCGGTTTTCCCTTCTGATCCACAGCCTAATATTTTGTGA 1056 0.4441 MPVSDSHSAAPNFIPKGLLFNAAAGASAGVIAATFVCPLDVIKTRLQVNGAPQLPNARVKVGSVIVGSLEQIFRKEGLRGMYRGLAPTVLALLPNWAVYFTMYEHLKSLLHSDDGSHHLPVGANMIAASGAGAATTMFTNPLWVVKTRLQNVDLTLLDLCMASMQDEKTSIRLLFIYDTGTQGMRAGVVPYSSTLSALRRIAHEEGIRGLYSGLVPALAGISHVAIQFPTYETIKFYLANHDESAVDKLGARDVAIASSVSKIFASTLTYPHEVVRSRLQEQGHHSEKRYLGVIDCVRKVFQQEGVSGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSVFPSDPQPNIL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0248 351 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 181 349 IPR044712 GO:0006862|GO:0055085
Lal5g0248 351 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 13 153 IPR044712 GO:0006862|GO:0055085
Lal5g0248 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 16 109 IPR018108 -
Lal5g0248 351 SUPERFAMILY Mitochondrial carrier 18 333 IPR023395 -
Lal5g0248 351 PRINTS Mitochondrial carrier protein signature 21 34 IPR002067 GO:0055085
Lal5g0248 351 PRINTS Mitochondrial carrier protein signature 34 48 IPR002067 GO:0055085
Lal5g0248 351 PRINTS Mitochondrial carrier protein signature 84 104 IPR002067 GO:0055085
Lal5g0248 351 PRINTS Mitochondrial carrier protein signature 134 152 IPR002067 GO:0055085
Lal5g0248 351 PRINTS Mitochondrial carrier protein signature 258 280 IPR002067 GO:0055085
Lal5g0248 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 119 237 IPR018108 -
Lal5g0248 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 249 337 IPR018108 -
Lal5g0248 351 Gene3D Mitochondrial carrier domain 21 341 IPR023395 -
Lal5g0248 351 Pfam Mitochondrial carrier protein 119 240 IPR018108 -
Lal5g0248 351 Pfam Mitochondrial carrier protein 21 112 IPR018108 -
Lal5g0248 351 Pfam Mitochondrial carrier protein 255 339 IPR018108 -
Lal5g0248 351 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 181 349 - -
Lal5g0248 351 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 13 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0248 Lal-Chr5 2176467 2181527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0248 6 351 Chloroplast and Mitochondria Gene Families AT2G47490 68.497 2.36e-151 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0248 K15115 - gmx:100500213 520.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0248 5 2176467 2181527 Lal5g0248 5 2176467 2181527 ECH