Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0226 ATGCAATTCTCAAAATTATTTTCCTTCATTTTCACTTTTCATGTCCTTGTTTTCAGTTTTTGTGAATCCCAACAATGTAACAAAAACAATCCAATAACTACAATTTCTGTTAGTCAAAGAGGAGATGCAAATTTCACAACAATTCAAAGTGCCATTGATTCAGTTCCACAAGGAAACTCTCAATGGATTCACATTACTATTGCTTCTGGTACTTACAAGTATAATAATCACAACATAGTAGATGAAAAGAAAAATGTGACTCCAGCAGTAGCAATTCGAGTTCATGCTGATAAATGTGCTTTAATTAATTGTGGTTTTGTTGGAGTTCAAGATACCCTTTTTGATTCTTTTGGACGCCATTACTATTACAATTGCTACATTTATGGTCACACTGATTTCATTTTTGGAAAGGGTCAATCACTATTTCAGGATTGTAAAATATATTTTTCAAATGGGCTAGCTGAACCACGTGATGGGGTTATTACAGCAAATGAAAGAAACTCATTAGAAGATCCAAGTGCATTTGTGTTCAAAAATTGTACATTTGATGGAACAAAAGGAATTAAAACAAATCTTGGAAGAGCATTGGAATCAGGAAATCCAAGAGTTATAATATCAGATTCTTACTTAGCTGATATTATTAGACCAGAAGGTTGGAATGAAGTTGAACACTTTGTTGGCTCTGAGGGAAACATCACATTTGTAGAAGTGGGATGCAGAGGAGCAGGATCAAATATGAGTGGTCGTGTACCTTGGATCAATAAATTAAGTGATTATGAGATTAATCGATTATTGGATCTCTCTTTTATTGATAATGAAGGGTGGACTTCAAATTTTCCAATACCAATTTTAACTTAA 858 0.3322 MQFSKLFSFIFTFHVLVFSFCESQQCNKNNPITTISVSQRGDANFTTIQSAIDSVPQGNSQWIHITIASGTYKYNNHNIVDEKKNVTPAVAIRVHADKCALINCGFVGVQDTLFDSFGRHYYYNCYIYGHTDFIFGKGQSLFQDCKIYFSNGLAEPRDGVITANERNSLEDPSAFVFKNCTFDGTKGIKTNLGRALESGNPRVIISDSYLADIIRPEGWNEVEHFVGSEGNITFVEVGCRGAGSNMSGRVPWINKLSDYEINRLLDLSFIDNEGWTSNFPIPILT 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0226 285 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 82 280 - -
Lal5g0226 285 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 73 - -
Lal5g0226 285 Pfam Pectinesterase 88 261 IPR000070 GO:0030599|GO:0042545
Lal5g0226 285 PANTHER PECTINESTERASE 5 73 - -
Lal5g0226 285 PANTHER PECTINESTERASE 82 280 - -
Lal5g0226 285 SUPERFAMILY Pectin lyase-like 34 282 IPR011050 -
Lal5g0226 285 Gene3D - 32 84 IPR012334 -
Lal5g0226 285 Gene3D - 85 284 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0226 Lal-Chr5 1960209 1965435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0226 89 275 Carbohydrate Esterase AT1G05310 42.408 2.11e-44 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0226 - - cam:101494460 272.707