Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0205 ATGACCTACCACATGGAGAAGGGACACAACCACAATGAATTAACCCTCTTAAATTCTAGCCATAATATAGATCCTATAATCAAAGAAGTGGATTTCTTTGCATCTAATAATCATAATAACAAGAAAAGTGATAGTTCTAATGATGATAATCATCATCAAAAGCAGCAACATGATCAACATCAACATGGATCATCAACTCTCCTTATTGATCATCATGTAAACACTGGGTTATATTTAACGTGTGCAAGTGGTGGAATATCAAGACCAACTAATAGTGAAAATCATAAAACTCAGATGATTAAACTTGAAAATGAATTACTAAGAGTACAAGAAGAGAATCACATGTTGAAAATTGCACTGGATCAGATCAATAAAAGCTATAACCAACTACAAGTTCAGCTGTTCATCTCTTTGCAGAATCAAAAGCCTAATCAGAATGTAGAAGAAAATAGAATGGTATCAGGACAAAAAATGATGGACCCACAAGAATGCACAAAACTAGACGCCATTGATACATTAGTTTCTAATGATAAGACAAATCAAGAGGTTTGTGGTGATTCTCATGCATTAGTAGATAGGTCATCCTCACAAAGTTGGGCATCATCCTCATCCAAGAGTCCTAAGATAGAAGAAGAAGCCAAAACTGAGGAACATGTTGTGGCTGATCAACTTCCATTCAGAAAAGCTAGGGTTTCCGTACGAGCAAGATCAGAAGCTACTACGATTAGTGATGGATGTCAATGGAGGAAATATGGCCAAAAAATGGCAAAGGGTAACCCTTGTCCTCGTGCTTACTATCGTTGTACTATGGCCGTAGGATGTCTTGTCCGTAAGCAGGTACAAAGATGTGCACAAGACAAGACAGTTCTAATAACAACATATGAAGGAAATCACAACCATCCTCTTCCACCAGTAGCAACAGCCATGGCCAATACAACTTCAGCAGCAGCATCAATGCTTCTTTCAGGTTCAACACACATCAATGAATCACTAACAACTTCTTCAGGATCATATTTCTCTTCAATGGCAACCCTATCAGCTTCTGCACCATTTCCAACCATAACCCTAGACTTAACACAAAACCCTAACAACAACAACAACAACAACACCATGCAGCAGCTTCACTCAAGATACTACCCTACTCTTCCATTGCAGCATGCAGGTTCTCTTGGTGGTTCCTACCTTCTAGGGAAACCCTTATTCTTCTCACAAAAGATGGTTCCTAATTCTTCAACTATGATGCCCTTAGTTCAACTAGGGCAAAGAAACAATTCATCTGTGGTTGAAACTGTGAGTGCAGCAATTGCTTCTGATCCTAACTTCACTGCAGCTTTGGCTGGAGCAATCTCATCAATCATTGGAAGAGGTGGAAATAGTAATAATGTTATAAGTAACAATGGAAATGGTGGTGCTGTGTTACCCGAATCACAGTCATGCACAACATTCTCTAAAAACTAG 1458 0.3868 MTYHMEKGHNHNELTLLNSSHNIDPIIKEVDFFASNNHNNKKSDSSNDDNHHQKQQHDQHQHGSSTLLIDHHVNTGLYLTCASGGISRPTNSENHKTQMIKLENELLRVQEENHMLKIALDQINKSYNQLQVQLFISLQNQKPNQNVEENRMVSGQKMMDPQECTKLDAIDTLVSNDKTNQEVCGDSHALVDRSSSQSWASSSSKSPKIEEEAKTEEHVVADQLPFRKARVSVRARSEATTISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCLVRKQVQRCAQDKTVLITTYEGNHNHPLPPVATAMANTTSAAASMLLSGSTHINESLTTSSGSYFSSMATLSASAPFPTITLDLTQNPNNNNNNNTMQQLHSRYYPTLPLQHAGSLGGSYLLGKPLFFSQKMVPNSSTMMPLVQLGQRNNSSVVETVSAAIASDPNFTAALAGAISSIIGRGGNSNNVISNNGNGGAVLPESQSCTTFSKN 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0205 485 Pfam WRKY DNA -binding domain 244 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal5g0205 485 Coils Coil 92 119 - -
Lal5g0205 485 SMART WRKY_cls 242 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal5g0205 485 MobiDBLite consensus disorder prediction 36 64 - -
Lal5g0205 485 Gene3D WRKY domain 226 304 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal5g0205 485 MobiDBLite consensus disorder prediction 42 59 - -
Lal5g0205 485 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 23 483 IPR044810 GO:0003700
Lal5g0205 485 SUPERFAMILY WRKY DNA-binding domain 235 303 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal5g0205 485 PANTHER WRKY TRANSCRIPTION FACTOR 47-RELATED 23 483 - -
Lal5g0205 485 ProSiteProfiles WRKY domain profile. 237 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal5g0205 485 MobiDBLite consensus disorder prediction 195 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0205 Lal-Chr5 1779149 1785339 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0205 27 485 WRKY Transcription Factor Family AT4G01720 41.750 1.76e-83 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal5g0205 WRKY 2.9e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0205 - - lang:109329451 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0205 5 1779149 1785339 Lal5g0205 5 1779149 1785339 ECH