Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0198 ATGAAGAAGCTGATTCTTGTGATAATCATTTTAGCCTTTGTTATCTGTGCTAGATCTGAGACTACAGACATAACAAACTCTCTCTTTTCTTTCTCTCAAAACGACGCCGTTCAACCTCAGCCTCTCACCATTCCTCTCACTCTTATTCAATCTGCTGCTTCCAAAGGAGCTGTTTGTTTGGATGGAACATTGCCTGGTTACCACTTTCATCCTGGATCTGGATCTGGTGCAAACAGTTGGCTCATTCAATTAGAGGGAGGAGGGTGGTGTAATACCATCAAAAGTTGTGTGTTTCGAAAAACTACTCGTCGCGGTTCGTCAAAGTTCATGGAAAAACAACTACCATTCACGGGGATATTGAGCAACAAAGCTGAAGAAAACCCCGATTTCTTTAACTGGAATAGAATCAAAGTACGATACTGTGATGGAGCATCTTTCAGTGGAGATAGTGAAAATGAGTCTGCACAGCTTCAATTTCGAGGACAAAAAATATGGCTAGCTGCAATGGACGAATTAATGTCCAAGGGAATGAACAAAGCCAACCAGGCCCTTCTCTCTGGATGCTCTGCAGGCGGTGTAGCATCTATAATACATTGTGATGAGTTCCGGAACTTGTTTCCACAATCTACCAAAGTGAAATGTTTGAGTGATGCGGGATTTTTCCTTGATGCAGTTGATGTATCTGGGGGGCGCACACTGAGGAATCTGTTTGGAGGTGTAGTTAACTTGCAGGAAGTGCAAAAAAATCTACCACAAAGCTGTCTTAGCAAACTGGACCCAACTTCGTGCTTCTTTCCTCAAAATTTGATCGACCATGTTCAGACTCCACTATTTCTACTCAATGCAGCTTATGATGCATGGCAGGTCCATGAAAGTTTAGCCCCACGTTCAGCTGATCCCCATGGCTCTTGGAATGACTGTAAATCAAATAATGCAAAATGTAACTCATCTCAAATTCAGTTTCTCCAAGACTTCAGAAATCAAATGCTAAATGACGTGAAAGGCTTCTCATCGTCATCTCAAACTGGATTGTTCATAAATTCTTGTTTTGCTCATTGCCAGTCTGAGAGACAAGATACATGGTTTGCTGACGACTCTCCACTTATCGACAATAAGCCGGTAGCAATTGCTGTTGGAGATTGGTATTTTGATCGACAAGCTGTCAAAGCTATTGACTGTGCTTACCCCTGTGACACCACCTGTCATAATTTGGTCTTCAATGTTCATAGATCTGCAATAGTAGACTCAAATTCTCAGCCCTCAAGTGATGAATCATTTAGCATGATGTATTCCCACTCCACAAAGTTGACTTATACAGGCCTATATATGCTAAGTGTTTTGTTGCTAATTACATGTTCCTTGTGA 1365 0.4161 MKKLILVIIILAFVICARSETTDITNSLFSFSQNDAVQPQPLTIPLTLIQSAASKGAVCLDGTLPGYHFHPGSGSGANSWLIQLEGGGWCNTIKSCVFRKTTRRGSSKFMEKQLPFTGILSNKAEENPDFFNWNRIKVRYCDGASFSGDSENESAQLQFRGQKIWLAAMDELMSKGMNKANQALLSGCSAGGVASIIHCDEFRNLFPQSTKVKCLSDAGFFLDAVDVSGGRTLRNLFGGVVNLQEVQKNLPQSCLSKLDPTSCFFPQNLIDHVQTPLFLLNAAYDAWQVHESLAPRSADPHGSWNDCKSNNAKCNSSQIQFLQDFRNQMLNDVKGFSSSSQTGLFINSCFAHCQSERQDTWFADDSPLIDNKPVAIAVGDWYFDRQAVKAIDCAYPCDTTCHNLVFNVHRSAIVDSNSQPSSDESFSMMYSHSTKLTYTGLYMLSVLLLITCSL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0198 454 Pfam Pectinacetylesterase 38 387 IPR004963 GO:0016787
Lal5g0198 454 PANTHER PECTIN ACETYLESTERASE 1 422 - -
Lal5g0198 454 PANTHER NOTUM-RELATED 1 422 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0198 Lal-Chr5 1710501 1717222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0198 32 406 Carbohydrate Esterase AT1G57590 71.543 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0198 K19882 - gmx:100785270 743.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0567 13 3707710 3712240 Lal5g0198 5 1710501 1717222 ECH
Lal19g1166 19 15145456 15151324 Lal5g0198 5 1710501 1717222 ECH
Lal5g0198 5 1710501 1717222 Lal5g0198 5 1710501 1717222 ECH
Lal5g0198 5 1710501 1717222 Lal13g0567 13 3707710 3712240 PCT
Lal13g0567 13 3707710 3712240 Lal5g0198 5 1710501 1717222 PCT