Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0179 ATGAAAGACAAAGCTGGGATAGCAAAGGTGTTTGGAACATTTTTGTGTGTAGGTGGAGCATTGCTTTTATCATATTATCATGGAAAAACCATTGGTTTAGGTGAATCAAGTATTCATTGGAGATTTTCTGAGAAAATGGAAGGAACAATCTCTTATAGCAGCAAAACAAACTTGCTTCTTGGCCCTTTTGCCATAATTTGTAGTGCACTTGTTTGGGCATTGTGGTTCATAATTCAAGCAGATATGAGTAAAACATTTTCAGCTCCTTATACTAGCACTGCCTATATGTGTTTCTTAGGAAGCTTTCAGTGTGTGGCCATTGCCTTGTGTTTTGAATCCACTGCCTCAGCTTGGTCACTCAACAATGCTATGAGACTTATATCTTCTCTATATGCGGGAGTAATTTGCACAGGGCTAGCATATTGTCTCATGTCATGGACCATAGCAAGAAAAGGTCCTCTTTATGTCTCTATATTCAGTCCCTTGCAGCTTATCATCACTGCTGTTGTAAGCTGGGCTCTACTTAGAGAGAAATTATACCTTGGAACTGTGATAGGGTCTCTCCTCATAGTTTTGGGGCTCTATTTTGTTCTTTGGGGAAAGAACAAAGAGATGAATAAGGAAGACATCATTGAAGTGAGAATCATAGAATCAATCAAAGATAATGAGAAGGATGAGAAGAATGATCTGAAATTGTAA 699 0.3834 MKDKAGIAKVFGTFLCVGGALLLSYYHGKTIGLGESSIHWRFSEKMEGTISYSSKTNLLLGPFAIICSALVWALWFIIQADMSKTFSAPYTSTAYMCFLGSFQCVAIALCFESTASAWSLNNAMRLISSLYAGVICTGLAYCLMSWTIARKGPLYVSIFSPLQLIITAVVSWALLREKLYLGTVIGSLLIVLGLYFVLWGKNKEMNKEDIIEVRIIESIKDNEKDEKNDLKL 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0179 232 Pfam EamA-like transporter family 60 198 IPR000620 GO:0016020|GO:0016021
Lal5g0179 232 PANTHER WAT1-RELATED PROTEIN 4 214 IPR030184 GO:0016021|GO:0022857
Lal5g0179 232 SUPERFAMILY Multidrug resistance efflux transporter EmrE 105 203 - -
Lal5g0179 232 PANTHER WAT1-RELATED PROTEIN 4 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0179 Lal-Chr5 1548950 1551686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0179 1 202 Nodulin-like Gene Family AT1G09380 58.911 1.92e-84 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0179 - - gmx:100811613 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0179 5 1548950 1551686 Lal18g0384 18 3278916 3281546 LSH