Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0169 ATGGTACCAAAAGTACAATCTCAACAAGAGCATGAAGGTTGTAGTGGCAAAATTCCAATTCAGAAGTCAAAATGGAGTCATTTTCATACAAAACAAGCATCAATAATTGGCCTGAGAAATGTAATAAACTTGCAATGCTTGAATGATCATAATTCATACTTGGAAAATTTCCTGAGAAGATTGGTAAGAGAAGTGGTGGAAAGCAAAATCCAGGATTATCAATTTCCAAGACCAAGGATTAATAATCAAGCTAGCATATCTGGAACCAAACTCTTCCAATTATGTTTCATTAATAAGTTACCTGATAGAATTTTCAGCCTCTCTAATATCATAGCAGAAGATAAATCACCTCTTCAAATTGCACTATTTGATGTTAGTACTAAATCTATAGTAAAAAATGGTCCTTTATCCTCAATAAAGATAGAGATATGTGCCCTCAATGGTGACTTTGGATCAAGTGAGGATTGGACTGAAGATGAATTCAATGCTAATATCTTGAAAGAAAGAGAGGGTAAAGGGCCATTAGTGAATGGTGATAGGTTCATTACTCTAGAAAATGGTGTTGGTTGTATTACAAAAATGACCTTAACTGATAATTCAAGATGGTTAAGGAGCAGAAAGTTCAGGTTAGGTGCTAAAGTTGTGCAATCAAGTTCCATTGGGACAAATATTAAGGAAGGTAGAAGTGAAGCATTTATGGTCAAAGACTATAGAGGAGAATCATACAAGAAACACTACCCTCCGTCGTTGCACGACGATGTATGGCGTTTGGAGAAAATTAGCAAAGGCGGAAAAATCCACAGGCGGCTCGCTCTCGATGGAATTCACACTGTTAAGGATTTCTTGCAGTTATACACAGTTAATGAATCTTTATTGCTTGAGAAGTTTGGAAAATTTTCGAAGAAGTCGTGGGTAGCGATTACTACACATGCCAAGACTTGTGTCATAGATGATTCAAATCTTTACATCTATCAAACAGAAGAACCACCAATAGTGCTGGTTTTCAATTCAATCTACAACCTTGTTGAAGTGACTTTTGATGGCCAAAATTATTTTTCACCAGAAACTCTCACCCCTAATGATAAGATTGTAGTAGAACTAGTCAAGCAACATGCTTACAAAAATGTGAATAAAAATTTGAAATCGATCGATGAGACTTCGTTAAACTGCGTAAGACCATCGGCATTTCTAAGAGCAAGTCAATCTGATGCTCCAGATCAAGTTAAATTTTCAACAGCAGAAAATATATGTAAGTATAATTTTCTGGCTATTCCATTCACTGCCTTAAAAACTTTCATGTTTCTTATGTATGTTACTATAAGTTTTCGATCTCGGCCGATTTCGCCAGTTCTGCTTTTCATGTTGAACTCTTCTTTGCTATAA 1383 0.3565 MVPKVQSQQEHEGCSGKIPIQKSKWSHFHTKQASIIGLRNVINLQCLNDHNSYLENFLRRLVREVVESKIQDYQFPRPRINNQASISGTKLFQLCFINKLPDRIFSLSNIIAEDKSPLQIALFDVSTKSIVKNGPLSSIKIEICALNGDFGSSEDWTEDEFNANILKEREGKGPLVNGDRFITLENGVGCITKMTLTDNSRWLRSRKFRLGAKVVQSSSIGTNIKEGRSEAFMVKDYRGESYKKHYPPSLHDDVWRLEKISKGGKIHRRLALDGIHTVKDFLQLYTVNESLLLEKFGKFSKKSWVAITTHAKTCVIDDSNLYIYQTEEPPIVLVFNSIYNLVEVTFDGQNYFSPETLTPNDKIVVELVKQHAYKNVNKNLKSIDETSLNCVRPSAFLRASQSDAPDQVKFSTAENICKYNFLAIPFTALKTFMFLMYVTISFRSRPISPVLLFMLNSSLL 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0169 460 PANTHER OS02G0177800 PROTEIN 1 419 IPR012416 GO:0005516
Lal5g0169 460 Pfam Calmodulin binding protein central domain 249 314 IPR046830 -
Lal5g0169 460 PANTHER CALMODULIN-BINDING PROTEIN 1 419 - -
Lal5g0169 460 Pfam Calmodulin binding protein C-terminal domain 321 378 IPR046829 -
Lal5g0169 460 Pfam Calmodulin binding protein-like N-terminal domain 92 236 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0169 Lal-Chr5 1470640 1475033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0169 38 442 Calmodulin-binding Proteins AT5G26920 40.000 1.40e-90 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0169 - - lja:Lj1g3v4777410.1 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0169 5 1470640 1475033 Lal5g0169 5 1470640 1475033 ECH
Lal5g0169 5 1470640 1475033 Lal18g0372 18 3180260 3185372 LSH