Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0164 ATGGGAACAGAACAACTTTTACCATTTTCTGTTGTATCTGTGGTTGAAGATGTTCCTGAAAATCATGGTGGTAGATTGAGTGATGTTAACTTGGCTTCAAGAAAAGCTGAAGAAGCATCATTGAGAAGGTATGAAGCAACTGGTTGGCTTAGAAAAACAGTTGGAGTTGTTGGAGGGAAAGATTTACCAGCAGAGCCTTCTGAAGAAGATTTCAGGCTCGGATTGCGTAGCGGAATTATACTCTGCAATGTTCTTAATCGAATTCAACCCGGGGCAGTGCCTAAGGTAGTTGAAGCCCCCAATGATTCTGTTCTTATTCCTGATGGAGCAGCACTTTCTGTATATCAATACTTTGAAAATGTAAGGAACTTTCTTGTAGCTATGGAGGAAATGGGGATTCCCACCTTTGAAGCTTCTGATTTGGAACAGGGAGGAAAATCTTCAAGGATAGTGAATTGTGTTTTAGCACTTAAGTCTTATGCTGAATGGAAGCAAGGAGGGGAAATTGGAACATGGAAATATGGTGGCATTGGTACTCCAAAGCCGCCTACATCTGCGAAAACTGTTTTGAAGAAAATCTCGGAACCATTCATGAAGTCTTTAAGGACTACTACGCCATCGATCGACAGAGATGTTATGAGTGATCACTCTTCAAACAGCGATTCCGGGCAAGATCGAAATGAAGGGGGATCCTATCCTTCCTTACATTCATTAGTTCGCGAATATTTATGTGACAAGAAGCCAGAAGAAATTCCCATTTTTGTGGAGTCCCTGCTTAGCAAAGTGATGGAGGAGTGTGAACGTCGAATGCAATTCCAAAATGAAACGCTTAAACCAACTGAAGAAGAAAATGTACCTTGTGAAGTAGAATGTTCAATTTCAAAAGCTGCTTCTGTTGATGAAGATGCACAAGACCTGCAGAGTAGAGAGGAGTTACAAGAGGCATCTTATGATAAGCACAATGGCCATGAAGAATCAAGTAGCCGGAATTTGAAGACGCGAGAATTGATCCAACAACAAAATAGAAGCATTCAGGAATTGAAAACTATAGTCTATGAAACAAAATCAGGAATGCAATTTCTGCAAAAGAGATACCAAGAAGATATCATCTATCTAAGTAAGAACCTGGATAGCCTATCTTCTGCTGCATCAGGATATCATAAAGTTATCGAAGAAAATCGGAAGTTATACAATCAAGTACAGGACCTGAAAGGAAATATTCGGGTGTACTGCCGAGTTCGACCCTTCTTAGGTGACCAACAAAGCCATAATAGCTCTGTCAGCAATGTGGAGGAGGGAAGTATCTCAATCTTAACACCTTTCAAATACAGCAAAGAAGAAAAGAAGACATTTAATTTCAATAGAGCATTTGGTCCTTCTGCAACCCAAGCGGAAGTTTTCTCCGATATGCAGCCGCTGGTTCGATCTGTACTAGACGGGTACAACGTTTGTATATTTGCCTACGGCCAGACAGGATCAGGAAAAACACACACCATGTCTGGACCGGACGAACTTAATGAGGAAACAATAGGTGTTAACTACCGTGCATTGAGAGATCTTTTCCTTCTCTCGGAACAAAGGAAAGACATCATTAGCTATGATATTAGTGTTCAGATGCTTGAGATTTACAATGAACAAGTCAGAGACCTACTAACCATAGATGAAATTCGCAACAGTTCCCAAAATGGCATTAACGTGCCAGAGGCGAGCCTTATTCCTGTTTCATCAACTTCCGATGTCATAAGTTTGATGAACTTAGGACATAAGAATCGAGCTGTTGGTTCTACTGCCATGAACGATCGCAGCAGTCGTTCTCACAGCTGCTTGACAGTTCATGTTCAAGGAAAGTACTCGACATCGGGAACTACGATTCGCGGTAGTATGCATCTTGTCGACTTGGCAGGAAGTGAGAGGGCTGATAAATCTGAAGCCAGAGGGGATAGACTTAAGGAAGCTCAACATATCAATAAGTCACTTTCAGCCTTAGGAGATGTAATTGCTTCCCTTGCTTCAAAAAATGCACATGTTCCATACAGAAATAGTAAACTTACTCAACTACTTCAGGATTCACTAGGAGGACAAGCTAAGACACTTATGTTTGTTCATATTAGTCCTGAACTTGAAGCTCTTGGAGAAACACTTAGTACACTCAAGTTTGCTGAAAGAGTTTCCACTGTTGAACTTGGTGCTGCTAAAGTTAATAAATATAATAATAATTCAGATGTCAAAGAACTTAAAGAACAGATTGCTAGTCTGAAAGCAGCCATGGCTAGGAAAGATGGAGAACCAGGACGCTTTCAACAATCTTCCAATAGTAGTAGCCATGAATCACCAAAGTTGAAATCCTATGCATTTTCTCCCAAAAGATTTGGAAGCAAAACGCCAAGAGATTATTCTAGTAAACTAGAGGTACAGAAAAAAACAGCATCAAAGCTGAAAAGAAGAAGCTTAGATATACATGAAATGTATAGAAATTCACCTCAATGGCCACATGTTGGGAAACATATGATAAATGCAAAGGAAGATGATAAAGAATCATCAACTTCTAATGATTGGAATGATAAGATTATGATGAAAAGGAATGATAGCTTAACAAGTGATGATAGCTTAATGGGACAATGGGAAACATTGTTAAGTCCAAAATCTATTTCAGAAACTTCAAAAATGTGCAATAATGAACCTTCATTGCATGGTTATGATATCAACAATATCAATGATGAATTTGATGAGCTTGAGATTGCAACTAGTGATTCTTCAGAATCAGATTTGAATTGGTTATCATCAAATATACCTAGACCAACCAGCATTTCAAATGAATTAGCTTCTATGCCAAAGAAATCTTCAACTCTACCCAAACCATCAAAGATCCCAGAACCCAGGTAA 2883 0.3933 MGTEQLLPFSVVSVVEDVPENHGGRLSDVNLASRKAEEASLRRYEATGWLRKTVGVVGGKDLPAEPSEEDFRLGLRSGIILCNVLNRIQPGAVPKVVEAPNDSVLIPDGAALSVYQYFENVRNFLVAMEEMGIPTFEASDLEQGGKSSRIVNCVLALKSYAEWKQGGEIGTWKYGGIGTPKPPTSAKTVLKKISEPFMKSLRTTTPSIDRDVMSDHSSNSDSGQDRNEGGSYPSLHSLVREYLCDKKPEEIPIFVESLLSKVMEECERRMQFQNETLKPTEEENVPCEVECSISKAASVDEDAQDLQSREELQEASYDKHNGHEESSSRNLKTRELIQQQNRSIQELKTIVYETKSGMQFLQKRYQEDIIYLSKNLDSLSSAASGYHKVIEENRKLYNQVQDLKGNIRVYCRVRPFLGDQQSHNSSVSNVEEGSISILTPFKYSKEEKKTFNFNRAFGPSATQAEVFSDMQPLVRSVLDGYNVCIFAYGQTGSGKTHTMSGPDELNEETIGVNYRALRDLFLLSEQRKDIISYDISVQMLEIYNEQVRDLLTIDEIRNSSQNGINVPEASLIPVSSTSDVISLMNLGHKNRAVGSTAMNDRSSRSHSCLTVHVQGKYSTSGTTIRGSMHLVDLAGSERADKSEARGDRLKEAQHINKSLSALGDVIASLASKNAHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPELEALGETLSTLKFAERVSTVELGAAKVNKYNNNSDVKELKEQIASLKAAMARKDGEPGRFQQSSNSSSHESPKLKSYAFSPKRFGSKTPRDYSSKLEVQKKTASKLKRRSLDIHEMYRNSPQWPHVGKHMINAKEDDKESSTSNDWNDKIMMKRNDSLTSDDSLMGQWETLLSPKSISETSKMCNNEPSLHGYDINNINDEFDELEIATSDSSESDLNWLSSNIPRPTSISNELASMPKKSSTLPKPSKIPEPR 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0164 960 MobiDBLite consensus disorder prediction 794 811 - -
Lal5g0164 960 MobiDBLite consensus disorder prediction 298 332 - -
Lal5g0164 960 Coils Coil 263 283 - -
Lal5g0164 960 Coils Coil 386 406 - -
Lal5g0164 960 Gene3D Kinesin motor domain 401 767 IPR036961 -
Lal5g0164 960 PANTHER KINESIN-LIKE PROTEIN KLP-3 6 957 - -
Lal5g0164 960 Pfam Calponin homology (CH) domain 42 162 IPR001715 GO:0005515
Lal5g0164 960 MobiDBLite consensus disorder prediction 917 949 - -
Lal5g0164 960 SMART kinesin_4 404 734 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal5g0164 960 MobiDBLite consensus disorder prediction 915 960 - -
Lal5g0164 960 SMART ch_5 42 160 IPR001715 GO:0005515
Lal5g0164 960 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 406 761 IPR027417 -
Lal5g0164 960 MobiDBLite consensus disorder prediction 764 780 - -
Lal5g0164 960 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Lal5g0164 960 MobiDBLite consensus disorder prediction 302 331 - -
Lal5g0164 960 CDD KISc_C_terminal 404 728 - -
Lal5g0164 960 Pfam Kinesin motor domain 412 725 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal5g0164 960 MobiDBLite consensus disorder prediction 757 811 - -
Lal5g0164 960 Gene3D - 27 175 IPR036872 -
Lal5g0164 960 MobiDBLite consensus disorder prediction 204 231 - -
Lal5g0164 960 SUPERFAMILY Calponin-homology domain, CH-domain 44 174 IPR036872 -
Lal5g0164 960 PANTHER KINESIN-LIKE PROTEIN KIN-14H 6 957 - -
Lal5g0164 960 ProSitePatterns Kinesin motor domain signature. 626 637 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lal5g0164 960 ProSiteProfiles Kinesin motor domain profile. 406 726 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal5g0164 960 Coils Coil 742 762 - -
Lal5g0164 960 PRINTS Kinesin heavy chain signature 480 501 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal5g0164 960 PRINTS Kinesin heavy chain signature 596 613 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal5g0164 960 PRINTS Kinesin heavy chain signature 627 645 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal5g0164 960 PRINTS Kinesin heavy chain signature 676 697 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal5g0164 960 MobiDBLite consensus disorder prediction 204 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0164 Lal-Chr5 1430280 1437359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0164 394 762 Calmodulin-binding Proteins AT5G65930 40.633 2.85e-74 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0164 K10406 - gmx:100799535 1278.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0164 5 1430280 1437359 Lal18g0371 18 3166959 3175543 ECH
Lal5g0164 5 1430280 1437359 Lal5g0164 5 1430280 1437359 ECH
Lal3g1439 3 20313700 20322431 Lal5g0164 5 1430280 1437359 LSH
Lal5g0164 5 1430280 1437359 Lal18g0371 18 3166959 3175543 LSH