Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0161 ATGGCATTGGTTAATTTCTTTTTCATTCTTATGCTTTTAGGTTTACCTTCATTTGATGCATTCTCAAATAATGAAACCCCTTTAGACCTTAAAACACAAGACATGCATGCAATGATTGCACAAGCATGCATGAACATTGAAAACCAAAACTCATGCCAAACCAATATCCAAAATGAGTTAACCAAATTTGGTTCTCATAGCCCAACTTCAATACTAAGTGCTGCAATGAGAACCACACTGAATGAAACTATAGGTGCCATTGATAAGATATCAAAGTTCACAACATTATCAATTAGCTACCGTGAACAATTAGCTATAGAAGATTGTAAAGAGCTTCTAGATTTCTCAGTATCTGAGTTAGCATGGTCCTTAGGAGAAATGAGAAGAATAAGAGAAGGTGATAACAATGTTGAATATGAGGGTAACCTTGAAGCTTGGTTAAGTGCTGCATTGAGTAACCAAGACACATGCATTGAAGGGTTTGAAGGCACAGATAGAAAACTTGAGAGTTACATTAGTGGAAGTTTGACACAAGTTACACAACTTATAAGTAATGTTTTATCATTATATACACAATTGCATAGTTTACCCTTTAGGCCTCCAAGGAAGAACAACAACACCAACACTCTAATAACAAAGCATGATGAAAGTTGGAAATTTCCTGAATGGATGAATGAGAATGATAAAGAGCTTCTTAAGTCTATGCCAAATGGTGCACATGATGCAGTTGTTGCATTGGATGGTAGTGGAAATTATAGAACAATCAATGAAGCTGTTAATGCAGCACCAAGTCATAGTAATAAGAAGTATGTTATATATGTGAAGAAAGGGATTTATAAAGAGAATGTTGATATGAAGAAAAAGATGACTAATATCATGCTTGTTGGTGATGGTATTGGTAGAACTATTATCACAAGTAACAGGAATTTCATGCAAGGATGGACCACTTTTCGAACTGCAACACTTGCTGTATCCGGGAAGGGATTCATTGCGAAGGACATGTCATTTCGGAACACAGCAGGACCAGTAAATCATCAAGCAGTGGCATTACGTGTAGATTCAGACCAATCTGCTTTCTTTAGATGCAGCATTGAAGGTTACCAAGACACTCTCTATGCACATTCACTTAGACAATTCTATAGAGAATGTGAAATATATGGCACCATAGATTTCATTTTTGGAAATGGTGCAGCTGTGTTACAAAATTGCAAAATATACACAAGAGTTCCACTTCCATTACAAAAGGTTACAATCACAGCACAAGGTAGAAAAAGTCCACATCAAAACACAGGTTTCACAATACAAGATAGTTATATTTTAGCAACACAACCTACATATTTGGGTAGGCCATGGAAAGAATATTCTAGAACAGTTTATATTAATACATATATGAGTAGTAAAGTTCAACCTCAAGGGTGGCTTGAATGGTTTGGAAACTTTGCATTAGAGACATTATGGTATGGTGAGTATAGAAATTATGGTCCTGGTTCATCACTTAAAGGTAGGGTTAAATGGCATGGTTATCATATAATTAAAGATGCTATGGCTGCTAATTTCTTCACTGTTCAAAGGTTCATTAATGGTGACTCATGGTTACCTAGAACAGGTATCAAGTTCACTTCAGGCTTGACCAATTGA 1638 0.3584 MALVNFFFILMLLGLPSFDAFSNNETPLDLKTQDMHAMIAQACMNIENQNSCQTNIQNELTKFGSHSPTSILSAAMRTTLNETIGAIDKISKFTTLSISYREQLAIEDCKELLDFSVSELAWSLGEMRRIREGDNNVEYEGNLEAWLSAALSNQDTCIEGFEGTDRKLESYISGSLTQVTQLISNVLSLYTQLHSLPFRPPRKNNNTNTLITKHDESWKFPEWMNENDKELLKSMPNGAHDAVVALDGSGNYRTINEAVNAAPSHSNKKYVIYVKKGIYKENVDMKKKMTNIMLVGDGIGRTIITSNRNFMQGWTTFRTATLAVSGKGFIAKDMSFRNTAGPVNHQAVALRVDSDQSAFFRCSIEGYQDTLYAHSLRQFYRECEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPHQNTGFTIQDSYILATQPTYLGRPWKEYSRTVYINTYMSSKVQPQGWLEWFGNFALETLWYGEYRNYGPGSSLKGRVKWHGYHIIKDAMAANFFTVQRFINGDSWLPRTGIKFTSGLTN 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0161 545 PANTHER PECTINESTERASE 13 543 - -
Lal5g0161 545 TIGRFAM PME_inhib: pectinesterase inhibitor domain 2 194 IPR006501 GO:0004857
Lal5g0161 545 SUPERFAMILY Pectin lyase-like 239 542 IPR011050 -
Lal5g0161 545 SMART PMEI_2 34 189 IPR006501 GO:0004857
Lal5g0161 545 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 194 IPR035513 -
Lal5g0161 545 ProSitePatterns Pectinesterase signature 2. 385 394 IPR033131 -
Lal5g0161 545 Pfam Pectinesterase 241 529 IPR000070 GO:0030599|GO:0042545
Lal5g0161 545 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 194 IPR035513 -
Lal5g0161 545 ProSitePatterns Pectinesterase signature 1. 266 285 IPR018040 -
Lal5g0161 545 CDD PMEI-like_4 60 193 - -
Lal5g0161 545 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 22-RELATED 13 543 - -
Lal5g0161 545 Pfam Plant invertase/pectin methylesterase inhibitor 38 189 IPR006501 GO:0004857
Lal5g0161 545 Gene3D - 237 543 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0161 Lal-Chr5 1386391 1389174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0161 1 545 Carbohydrate Esterase AT3G05620 61.360 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0161 K01051 - gmx:100810565 902.123